Gene: Sopen11g008140
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen11g008140
- Transcript Identifier Sopen11g008140.1
- Gene Type Coding gene
- Location Spenn-ch11 : 7159695-7166711 : negative
Gene Family Information
- ID HOM05D000024
- #Genes/#Species 5884/44
- Phylogenetic origin
- ID ORTHO05D000022
- #Genes/#Species 4043/78
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Sopen11g008140.1
Descriptions
- Description Ribonuclease H-like superfamily protein | FUNCTIONS IN: RNA binding, RNA-directed DNA polymerase activity, nucleic acid binding | INVOLVED IN: RNA-dependent DNA replication | LOCATED IN: endomembrane system | CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0004523 | IEA | InterPro | RNA-DNA hybrid ribonuclease activity |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036691 | Endonuclease/exonuclease/phosphatase superfamily |
| IPR025558 | Domain of unknown function DUF4283 |
| IPR036397 | Ribonuclease H superfamily |
| IPR002156 | Ribonuclease H domain |
| IPR026960 | Reverse transcriptase zinc-binding domain |
| IPR044730 | Ribonuclease H-like domain, plant type |
| IPR012337 | Ribonuclease H-like superfamily |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |