Gene: Sopen11g006610

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen11g006610
  • Transcript Identifier Sopen11g006610.1
  • Gene Type Coding gene
  • Location Spenn-ch11 : 4780909-4787041 : negative

Gene Family Information

  • ID HOM05D000317
  • #Genes/#Species 1458/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen11g006610.1

Descriptions

  • Description Encodes a KANADI protein (KAN) that regulates organ polarity in Arabidopsis. KAN is required for abaxial identity in both leaves and carpels, and encodes a nuclear-localized protein in the GARP family of putative transcription factors. Together with KAN2, this gene appears to be involved in the development of the carpel and the outer integument of the ovule.Along with KAN2 and KAN4, KAN1 appears to be required for proper regulation of PIN1 in early embryogenesis. | KANADI (KAN) | CONTAINS InterPro DOMAIN/s: Homeodomain-like , Myb, DNA-binding , Myb-like DNA-binding domain, SHAQKYF class , Homeodomain-related | BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0010158
IEA
InterProabaxial cell fate specification
GO:0048440
ISO
PLAZA Integrative Orthologycarpel development AT5G16560
GO:0010229
ISO
PLAZA Integrative Orthologyinflorescence development Os09g0395300
GO:0010051
ISO
PLAZA Integrative Orthologyxylem and phloem pattern formation AT5G16560
GO:0009956
ISO
PLAZA Integrative Orthologyradial pattern formation AT5G16560
GO:0048481
ISO
PLAZA Integrative Orthologyplant ovule development AT5G16560
GO:0009944
ISO
PLAZA Integrative Orthologypolarity specification of adaxial/abaxial axis AT5G16560
GO:0009943
ISO
PLAZA Integrative Orthologyadaxial/abaxial axis specification AT5G16560
GO:1905392
ISO
PLAZA Integrative Orthologyplant organ morphogenesis AT5G16560

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000976
IEA
InterProtranscription cis-regulatory region binding
GO:0003677
IEA
InterProDNA binding
GO:0003700
ISO
PLAZA Homology (enrichment)DNA-binding transcription factor activity HOM05D000317
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G16560

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G16560

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044847 Transcription repressor KANADI
IPR009057 Homeobox-like domain superfamily
IPR006447 Myb domain, plants
Mapman id Description
15.5.2.3 RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (GARP)