Gene: AT5G16560

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G16560
  • Transcript Identifier AT5G16560.1
  • Gene Type Coding gene
  • Location Chr5 : 5407365-5411092 : negative

Gene Family Information

  • ID HOM05D000317
  • #Genes/#Species 1458/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G16560.1
  • symbol KAN
  • Alias KAN1,KANADI 1
  • full_name KANADI
  • uniprot Q93WJ9

Descriptions

  • Description Homeodomain-like superfamily protein
  • Computational description KANADI (KAN); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G32240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010229
ISO
PLAZA Integrative Orthologyinflorescence development Os09g0395300
GO:0010158
IEA
GOA Databaseabaxial cell fate specification
GO:0010158
IMP
Gene Ontologyabaxial cell fate specification1
GO:0010158
IEA
InterProabaxial cell fate specification
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IBA
Gene Ontologyregulation of transcription, DNA-templated2
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0030154
IEA
GOA Databasecell differentiation
GO:0009943
IMP
Gene Ontologyadaxial/abaxial axis specification3
GO:0009944
IGI
Gene Ontologypolarity specification of adaxial/abaxial axis4
GO:0048481
IGI
Gene Ontologyplant ovule development5
GO:0048440
IGI
Gene Ontologycarpel development5
GO:0010051
IMP
Gene Ontologyxylem and phloem pattern formation6
GO:0009956
IMP
Gene Ontologyradial pattern formation6
GO:1905392
IMP
Gene Ontologyplant organ morphogenesis7

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000976
IEA
GOA Databasetranscription cis-regulatory region binding
GO:0000976
IPI
IBA
Gene Ontologytranscription cis-regulatory region binding2 8
GO:0000976
IEA
InterProtranscription cis-regulatory region binding
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0005515
IPI
Gene Ontologyprotein binding9
GO:0003700
ISS
Gene OntologyDNA-binding transcription factor activity10

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
ISS, ISM, IBA
Gene Ontologynucleus2 7

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006447 Myb domain, plants
IPR009057 Homeobox-like domain superfamily
IPR044847 Transcription repressor KANADI
Mapman id Description
15.5.2.3 RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (GARP)