Gene: Sopen11g006280
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen11g006280
- Transcript Identifier Sopen11g006280.1
- Gene Type Coding gene
- Location Spenn-ch11 : 4619175-4623360 : positive
Gene Family Information
- ID HOM05D006010
- #Genes/#Species 131/90
- Phylogenetic origin
- ID ORTHO05D007381
- #Genes/#Species 131/90
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen11g006280.1
Descriptions
- Description zinc ion binding | FUNCTIONS IN: zinc ion binding | INVOLVED IN: biological_process unknown | LOCATED IN: intracellular | EXPRESSED IN: 13 plant structures | EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage | CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0010030 | ISO | PLAZA Integrative Orthology | positive regulation of seed germination | AT3G02860 |
GO:0006979 | ISO | PLAZA Integrative Orthology | response to oxidative stress | AT3G02860 |
GO:0009737 | ISO | PLAZA Integrative Orthology | response to abscisic acid | AT3G02860 |
GO:0045892 | ISO | PLAZA Integrative Orthology | negative regulation of transcription, DNA-templated | AT3G02860 |
GO:0042542 | ISO | PLAZA Integrative Orthology | response to hydrogen peroxide | AT3G02860 |
GO:0048838 | ISO | PLAZA Integrative Orthology | release of seed from dormancy | AT3G02860 |
GO:1903427 | ISO | PLAZA Integrative Orthology | negative regulation of reactive oxygen species biosynthetic process | AT3G02860 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003676 | IEA | InterPro | nucleic acid binding | |
GO:0008270 | IEA | InterPro | zinc ion binding |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005681 | IEA | InterPro | spliceosomal complex | |
GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT3G02860 |
GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT3G02860 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
35.1 | not assigned.annotated |