Gene: Sopen11g006280

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen11g006280
  • Transcript Identifier Sopen11g006280.1
  • Gene Type Coding gene
  • Location Spenn-ch11 : 4619175-4623360 : positive

Gene Family Information

  • ID HOM05D006010
  • #Genes/#Species 131/90
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen11g006280.1

Descriptions

  • Description zinc ion binding | FUNCTIONS IN: zinc ion binding | INVOLVED IN: biological_process unknown | LOCATED IN: intracellular | EXPRESSED IN: 13 plant structures | EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage | CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010030
ISO
PLAZA Integrative Orthologypositive regulation of seed germination AT3G02860
GO:0006979
ISO
PLAZA Integrative Orthologyresponse to oxidative stress AT3G02860
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT3G02860
GO:0045892
ISO
PLAZA Integrative Orthologynegative regulation of transcription, DNA-templated AT3G02860
GO:0042542
ISO
PLAZA Integrative Orthologyresponse to hydrogen peroxide AT3G02860
GO:0048838
ISO
PLAZA Integrative Orthologyrelease of seed from dormancy AT3G02860
GO:1903427
ISO
PLAZA Integrative Orthologynegative regulation of reactive oxygen species biosynthetic process AT3G02860

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0008270
IEA
InterProzinc ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005681
IEA
InterProspliceosomal complex
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G02860
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G02860

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR040050 Zinc finger protein 830-like
IPR036236 Zinc finger C2H2 superfamily
Mapman id Description
35.1 not assigned.annotated