Gene: Sopen11g005620

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen11g005620
  • Transcript Identifier Sopen11g005620.2
  • Gene Type Coding gene
  • Location Spenn-ch11 : 3958358-3962966 : negative

Gene Family Information

  • ID HOM05D001154
  • #Genes/#Species 535/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen11g005620.2

Descriptions

  • Description Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplast precursor (EC 2.2.1.7) (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS) - Oryza sativa (Rice), Encodes a protein with 1-deoxyxylulose 5-phosphate synthase activity involved in the MEP pathway. It is essential for chloroplast development in Arabidopsis | CLOROPLASTOS ALTERADOS 1 (CLA1) | FUNCTIONS IN: 1-deoxy-D-xylulose-5-phosphate synthase activity | INVOLVED IN: chlorophyll biosynthetic process, response to light stimulus, isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway | LOCATED IN: chloroplast | EXPRESSED IN: 26 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Transketolase, N-terminal , Transketolase, C-terminal , Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II , Transketolase-like, pyrimidine-binding domain , Transketolase binding site , Transketolase-like, C-terminal , Deoxyxylulose-5-phosphate synthase , Dehydrogenase, E1 component | BEST Arabidopsis thaliana protein match is: 1-deoxy-D-xylulose 5-phosphate synthase 1
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016114
IEA
InterProterpenoid biosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003824
IEA
InterProcatalytic activity
GO:0008661
IEA
InterPro1-deoxy-D-xylulose-5-phosphate synthase activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II
IPR005477 Deoxyxylulose-5-phosphate synthase
IPR005475 Transketolase-like, pyrimidine-binding domain
IPR029061 Thiamin diphosphate-binding fold
IPR033248 Transketolase, C-terminal domain
Mapman id Description
9.1.2.2 Secondary metabolism.terpenoids.methylerythritol phosphate (MEP) pathway.1-deoxy-D-xylulose 5-phosphate synthase (DXS)