Gene: Sopen11g003170
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen11g003170
- Transcript Identifier Sopen11g003170.1
- Gene Type Coding gene
- Location Spenn-ch11 : 1763288-1769846 : positive
Gene Family Information
- ID HOM05D000103
- #Genes/#Species 3100/100
- Phylogenetic origin
- ID ORTHO05D000049
- #Genes/#Species 2857/100
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen11g003170.1
Descriptions
- Description Pleiotropic drug resistance protein 2 (NpPDR2) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco), pleiotropic drug resistance 6 (PDR6) | FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances | LOCATED IN: plasma membrane | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: ATPase, AAA type, core , ABC transporter-like , Plant PDR ABC transporter associated , ABC-2 type transporter | BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 11
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0042908 | ISO | PLAZA Integrative Orthology | xenobiotic transport | AT1G66950 |
| GO:0000302 | ISO | PLAZA Integrative Orthology | response to reactive oxygen species | AT1G66950 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0140359 | IEA | InterPro | ABC-type transporter activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016020 | IEA | InterPro | membrane | |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT2G36380 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR003439 | ABC transporter-like, ATP-binding domain |
| IPR034003 | ATP-binding cassette transporter, PDR-like subfamily G, domain 2 |
| IPR003593 | AAA+ ATPase domain |
| IPR013581 | Plant PDR ABC transporter associated |
| IPR029481 | ABC-transporter, N-terminal domain |
| IPR043926 | ABC transporter family G domain |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR034001 | ATP-binding cassette transporter, PDR-like subfamily G, domain 1 |
| IPR013525 | ABC-2 type transporter |
| Mapman id | Description |
|---|---|
| 24.1.3.2.2 | Solute transport.primary active transport.ABC superfamily.ABC2 family.subfamily ABCG transporter |