Gene: Sopen11g001240

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen11g001240
  • Transcript Identifier Sopen11g001240.1
  • Gene Type Coding gene
  • Location Spenn-ch11 : 211495-213122 : negative

Gene Family Information

  • ID HOM05D003562
  • #Genes/#Species 192/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen11g001240.1

Descriptions

  • Description Encodes a novel protein conserved in higher eukaryotes. Normal function of the protein is required for normal oscillator function during circadian rhythm. Mutant analyses also suggest a role in phytochrome B (phyB)-mediated light signaling. | SENSITIVITY TO RED LIGHT REDUCED 1 (SRR1) | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: regulation of circadian rhythm, red, far-red light phototransduction | LOCATED IN: nucleus, cytoplasm | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Sensitivity To Red Light Reduced-like, SRR1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0004523
IEA
InterProRNA-DNA hybrid ribonuclease activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044730 Ribonuclease H-like domain, plant type
IPR036397 Ribonuclease H superfamily
IPR040044 SRR1-like protein
IPR002156 Ribonuclease H domain
IPR012942 SRR1-like domain
Mapman id Description
35.1 not assigned.annotated