Gene: Sopen11g001120
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen11g001120
- Transcript Identifier Sopen11g001120.1
- Gene Type Coding gene
- Location Spenn-ch11 : 121864-123621 : negative
Gene Family Information
- ID HOM05D000042
- #Genes/#Species 4894/100
- Phylogenetic origin
- ID ORTHO05D000980
- #Genes/#Species 529/91
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen11g001120.1
Descriptions
- Description MADS-box protein FBP24 (Floral-binding protein 24) - Petunia hybrida (Petunia), Encodes a MADS box protein. Regulates proanthocyanidin biosynthesis in the inner-most cell layer of the seed coat. Also controls cell shape of the inner-most cell layer of the seed coat. Also shown to be necessary for determining the identity of the endothelial layer within the ovule. Paralogous to GOA. | TRANSPARENT TESTA16 (TT16) | FUNCTIONS IN: sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of cell shape, regulation of proanthocyanidin biosynthetic process, seed development, ovule development | LOCATED IN: nucleus | EXPRESSED IN: 10 plant structures | EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage | CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box , Transcription factor, K-box | BEST Arabidopsis thaliana protein match is: AGAMOUS-like 15
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0051302 | ISO | PLAZA Integrative Orthology | regulation of cell division | AT5G23260 |
GO:0048481 | ISO | PLAZA Integrative Orthology | plant ovule development | AT5G23260 |
GO:2000029 | ISO | PLAZA Integrative Orthology | regulation of proanthocyanidin biosynthetic process | AT5G23260 |
GO:0048316 | ISO | PLAZA Integrative Orthology | seed development | AT5G23260 |
GO:0043068 | ISO | PLAZA Integrative Orthology | positive regulation of programmed cell death | Os02g0170300 |
GO:0080155 | ISO | PLAZA Integrative Orthology | regulation of double fertilization forming a zygote and endosperm | AT5G23260 |
GO:0019252 | ISO | PLAZA Integrative Orthology | starch biosynthetic process | Os02g0170300 |
GO:0045595 | ISO | PLAZA Integrative Orthology | regulation of cell differentiation | AT5G23260 |
GO:0080060 | ISO | PLAZA Integrative Orthology | integument development | AT5G23260 |
GO:0008360 | ISO | PLAZA Integrative Orthology | regulation of cell shape | AT5G23260 |
GO:0045944 | IEA | InterPro | positive regulation of transcription by RNA polymerase II | |
GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G23260 |
GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
GO:0046983 | IEA | InterPro | protein dimerization activity | |
GO:0003677 | IEA | InterPro | DNA binding | |
GO:0000977 | IEA | InterPro | RNA polymerase II transcription regulatory region sequence-specific DNA binding |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005634 | IEA | InterPro | nucleus |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
15.5.14 | RNA biosynthesis.transcriptional regulation.transcription factor (MADS/AGL) |