Gene: Sopen11g001120

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen11g001120
  • Transcript Identifier Sopen11g001120.1
  • Gene Type Coding gene
  • Location Spenn-ch11 : 121864-123621 : negative

Gene Family Information

  • ID HOM05D000042
  • #Genes/#Species 4894/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen11g001120.1

Descriptions

  • Description MADS-box protein FBP24 (Floral-binding protein 24) - Petunia hybrida (Petunia), Encodes a MADS box protein. Regulates proanthocyanidin biosynthesis in the inner-most cell layer of the seed coat. Also controls cell shape of the inner-most cell layer of the seed coat. Also shown to be necessary for determining the identity of the endothelial layer within the ovule. Paralogous to GOA. | TRANSPARENT TESTA16 (TT16) | FUNCTIONS IN: sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of cell shape, regulation of proanthocyanidin biosynthetic process, seed development, ovule development | LOCATED IN: nucleus | EXPRESSED IN: 10 plant structures | EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage | CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box , Transcription factor, K-box | BEST Arabidopsis thaliana protein match is: AGAMOUS-like 15
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0051302
ISO
PLAZA Integrative Orthologyregulation of cell division AT5G23260
GO:0048481
ISO
PLAZA Integrative Orthologyplant ovule development AT5G23260
GO:2000029
ISO
PLAZA Integrative Orthologyregulation of proanthocyanidin biosynthetic process AT5G23260
GO:0048316
ISO
PLAZA Integrative Orthologyseed development AT5G23260
GO:0043068
ISO
PLAZA Integrative Orthologypositive regulation of programmed cell death Os02g0170300
GO:0080155
ISO
PLAZA Integrative Orthologyregulation of double fertilization forming a zygote and endosperm AT5G23260
GO:0019252
ISO
PLAZA Integrative Orthologystarch biosynthetic process Os02g0170300
GO:0045595
ISO
PLAZA Integrative Orthologyregulation of cell differentiation AT5G23260
GO:0080060
ISO
PLAZA Integrative Orthologyintegument development AT5G23260
GO:0008360
ISO
PLAZA Integrative Orthologyregulation of cell shape AT5G23260
GO:0045944
IEA
InterPropositive regulation of transcription by RNA polymerase II
GO:0006355
IEA
InterProregulation of transcription, DNA-templated

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G23260
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0046983
IEA
InterProprotein dimerization activity
GO:0003677
IEA
InterProDNA binding
GO:0000977
IEA
InterProRNA polymerase II transcription regulatory region sequence-specific DNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002487 Transcription factor, K-box
IPR033896 MADS MEF2-like
IPR002100 Transcription factor, MADS-box
IPR036879 Transcription factor, MADS-box superfamily
Mapman id Description
15.5.14 RNA biosynthesis.transcriptional regulation.transcription factor (MADS/AGL)