Gene: Sopen10g032480

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen10g032480
  • Transcript Identifier Sopen10g032480.1
  • Gene Type Coding gene
  • Location Spenn-ch10 : 79782921-79783598 : negative

Gene Family Information

  • ID HOM05D000980
  • #Genes/#Species 614/90
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen10g032480.1

Descriptions

  • Description Encodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression of this gene is induced by cucumber mosaic virus, spermine and during senescence. The gene product is localized to the chloroplast. | YELLOW-LEAF-SPECIFIC GENE 9 (YLS9) | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: defense response to virus, leaf senescence, response to other organism | LOCATED IN: chloroplast | EXPRESSED IN: 7 plant structures | EXPRESSED DURING: 4 anthesis, 4 leaf senescence stage, petal differentiation and expansion stage | CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 | BEST Arabidopsis thaliana protein match is: NDR1/HIN1-like 2
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0098542
IEA
InterProdefense response to other organism
GO:0051707
ISO
PLAZA Integrative Orthologyresponse to other organism AT2G35980
GO:0010150
ISO
PLAZA Integrative Orthologyleaf senescence AT2G35980
GO:0009611
ISO
PLAZA Integrative Orthologyresponse to wounding AT5G06320
GO:0009751
ISO
PLAZA Integrative Orthologyresponse to salicylic acid AT5G06320
GO:0042742
ISO
PLAZA Integrative Orthologydefense response to bacterium AT5G06320
GO:0009617
ISO
PLAZA Integrative Orthologyresponse to bacterium AT5G06320
GO:0051607
ISO
PLAZA Integrative Orthologydefense response to virus AT3G11650

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G06320
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT5G06320

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005794
ISO
PLAZA Integrative OrthologyGolgi apparatus AT5G06320
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT5G06320
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT5G06320
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT3G11650
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT3G11650

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR004864 Late embryogenesis abundant protein, LEA_2 subgroup
IPR044839 Protein NDR1-like
Mapman id Description
35.1 not assigned.annotated