Gene: AT5G06320

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G06320
  • Transcript Identifier AT5G06320.1
  • Gene Type Coding gene
  • Location Chr5 : 1931016-1931711 : negative

Gene Family Information

  • ID HOM05D000980
  • #Genes/#Species 614/90
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G06320.1
  • symbol NHL3
  • uniprot Q9FNH6

Descriptions

  • Description NDR1/HIN1-like 3
  • Computational description NDR1/HIN1-like 3 (NHL3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: defense response to virus, defense response to bacterium, response to bacterium; LOCATED IN: plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: NDR1/HIN1-like 2 (TAIR:AT3G11650.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0098542
IEA
GOA Databasedefense response to other organism
GO:0098542
IEA
InterProdefense response to other organism
GO:0006952
IEA
GOA Databasedefense response
GO:0071456
HEP
Gene Ontologycellular response to hypoxia1
GO:0051607
IEP
Gene Ontologydefense response to virus2
GO:0042742
IMP, IEP
Gene Ontologydefense response to bacterium3 4
GO:0009751
IEP
Gene Ontologyresponse to salicylic acid3
GO:0009617
IEP
Gene Ontologyresponse to bacterium3
GO:0009611
IEP
Gene Ontologyresponse to wounding3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
IDA
Gene OntologymRNA binding5
GO:0005515
IPI
Gene Ontologyprotein binding6

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
GOA Databasemembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0009506
IDA
GOA Databaseplasmodesma
GO:0009506
HDA
IBA
Gene Ontologyplasmodesma7 8
GO:0005774
IDA
GOA Databasevacuolar membrane
GO:0005794
IDA
GOA DatabaseGolgi apparatus
GO:0005794
HDA
Gene OntologyGolgi apparatus9
GO:0005886
IEA
GOA Databaseplasma membrane
GO:0005886
IDA, HDA
Gene Ontologyplasma membrane4 10
GO:0046658
IBA
Gene Ontologyanchored component of plasma membrane8
GO:0005739
ISM
Gene Ontologymitochondrion
GO:0000325
HDA
Gene Ontologyplant-type vacuole11

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR004864 Late embryogenesis abundant protein, LEA_2 subgroup
IPR044839 Protein NDR1-like
Mapman id Description
35.1 not assigned.annotated