Gene: Sopen10g030810

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen10g030810
  • Transcript Identifier Sopen10g030810.1
  • Gene Type Coding gene
  • Location Spenn-ch10 : 78412956-78416864 : negative

Gene Family Information

  • ID HOM05D002495
  • #Genes/#Species 273/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen10g030810.1

Descriptions

  • Description zinc finger (C2H2 type, AN1-like) family protein | FUNCTIONS IN: zinc ion binding, nucleic acid binding | INVOLVED IN: biological_process unknown | LOCATED IN: intracellular | CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like , Zinc finger, AN1-type , Zinc finger, C2H2-type | BEST Arabidopsis thaliana protein match is: zinc finger (C2H2 type, AN1-like) family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT3G28210
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT3G57480
GO:0097501
ISO
PLAZA Integrative Orthologystress response to metal ion AT3G57480
GO:0010200
ISO
PLAZA Integrative Orthologyresponse to chitin AT3G28210

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
IEA
InterProzinc ion binding
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT3G57480

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G57480
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT3G57480

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035896 AN1-like Zinc finger
IPR013087 Zinc finger C2H2-type
IPR000058 Zinc finger, AN1-type
IPR036236 Zinc finger C2H2 superfamily
Mapman id Description
35.1 not assigned.annotated