Gene: Sopen10g029670

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen10g029670
  • Transcript Identifier Sopen10g029670.1
  • Gene Type Coding gene
  • Location Spenn-ch10 : 77464964-77466801 : negative

Gene Family Information

  • ID HOM05D000064
  • #Genes/#Species 3993/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen10g029670.1

Descriptions

  • Description Encodes RABA4D, a member of the Arabidopsis RabA4 subfamily of Rab GTPase proteins. It is transported in exocytic vesicles to the apical tip of pollen tubes where it appears to promote tip growth. Proper localization of RabA4d depends on ROP1, RIC3, and RIC4 activity. | RAB GTPase homolog A4D (RABA4D) | FUNCTIONS IN: GTP binding | INVOLVED IN: regulation of pollen tube growth, pollen tube growth, pollen tube development | LOCATED IN: exocytic vesicle, apical part of cell | EXPRESSED IN: 8 plant structures | EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage | CONTAINS InterPro DOMAIN/s: Ras GTPase , Small GTP-binding protein , Small GTPase , Ras , Ras small GTPase, Rab type , Rab11-related | BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A4C
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009860
ISO
PLAZA Integrative Orthologypollen tube growth AT3G12160
GO:0048868
ISO
PLAZA Integrative Orthologypollen tube development AT3G12160
GO:0080092
ISO
PLAZA Integrative Orthologyregulation of pollen tube growth AT3G12160

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005525
IEA
InterProGTP binding
GO:0003924
IEA
InterProGTPase activity
GO:0019900
ISO
PLAZA Integrative Orthologykinase binding AT3G12160

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0070382
ISO
PLAZA Integrative Orthologyexocytic vesicle AT3G12160
GO:0090404
ISO
PLAZA Integrative Orthologypollen tube tip AT3G12160
GO:0045177
ISO
PLAZA Integrative Orthologyapical part of cell AT3G12160

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR005225 Small GTP-binding protein domain
IPR001806 Small GTPase
Mapman id Description
22.3.4.1.1 Vesicle trafficking.post-Golgi trafficking.vesicle tethering.RAB-GTPase activities.A-class RAB GTPase