Gene: Sopen10g024260

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen10g024260
  • Transcript Identifier Sopen10g024260.1
  • Gene Type Coding gene
  • Location Spenn-ch10 : 66190764-66191594 : negative

Gene Family Information

  • ID HOM05D002519
  • #Genes/#Species 269/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen10g024260.1

Descriptions

  • Description Transcription initiation factor IIF, beta subunit | FUNCTIONS IN: RNA polymerase II transcription factor activity, catalytic activity, ATP binding | INVOLVED IN: transcription initiation from RNA polymerase II promoter | LOCATED IN: transcription factor TFIIF complex | EXPRESSED IN: 9 plant structures | EXPRESSED DURING: M germinated pollen stage, 4 anthesis, F mature embryo stage, petal differentiation and expansion stage | CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding , Transcription Factor IIF, Rap30/Rap74, interaction , Transcription initiation factor IIF, beta subunit | BEST Arabidopsis thaliana protein match is: Transcription initiation factor IIF, beta subunit
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006366
IEA
InterProtranscription by RNA polymerase II
GO:0006367
IEA
InterProtranscription initiation from RNA polymerase II promoter

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005674
IEA
InterProtranscription factor TFIIF complex
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT1G75510

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR003196 Transcription initiation factor IIF, beta subunit
IPR036390 Winged helix DNA-binding domain superfamily
IPR011039 Transcription Factor IIF, Rap30/Rap74, interaction
IPR040450 TFIIF beta subunit, HTH domain
Mapman id Description
15.3.3.4.2 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription initiation.TFIIf basal transcription factor heterodimer.subunit beta