Gene: Sopen10g007890

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen10g007890
  • Transcript Identifier Sopen10g007890.1
  • Gene Type Coding gene
  • Location Spenn-ch10 : 9236477-9247165 : negative

Gene Family Information

  • ID HOM05D001748
  • #Genes/#Species 370/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen10g007890.1

Descriptions

  • Description Pyridoxal-5-phosphate-dependent enzyme family protein | FUNCTIONS IN: pyridoxal phosphate binding, tryptophan synthase activity, catalytic activity | INVOLVED IN: tryptophan biosynthetic process, metabolic process, tryptophan metabolic process | CONTAINS InterPro DOMAIN/s: Tryptophan synthase, beta chain , Tryptophan synthase, beta chain, conserved site , Pyridoxal phosphate-dependent enzyme, beta subunit | BEST Arabidopsis thaliana protein match is: tryptophan synthase beta-subunit 2
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006979
ISO
PLAZA Integrative Orthologyresponse to oxidative stress AT5G54810
GO:0000162
ISO
PLAZA Integrative Orthologytryptophan biosynthetic process AT4G27070
GO:0009684
ISO
PLAZA Integrative Orthologyindoleacetic acid biosynthetic process AT5G54810
GO:0006568
ISO
PLAZA Homology (enrichment)tryptophan metabolic process HOM05D001748

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004834
ISO
PLAZA Integrative Orthologytryptophan synthase activity AT4G27070
GO:0019904
ISO
PLAZA Integrative Orthologyprotein domain specific binding AT5G54810
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G27070

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT4G27070
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT4G27070
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT4G27070
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT5G54810

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme
IPR001926 Pyridoxal-phosphate dependent enzyme
Mapman id Description
50.4.2 Enzyme classification.EC_4 lyases.EC_4.2 carbon-oxygen lyase