Gene: Sopen10g007590

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen10g007590
  • Transcript Identifier Sopen10g007590.1
  • Gene Type Coding gene
  • Location Spenn-ch10 : 8122522-8129732 : negative

Gene Family Information

  • ID HOM05D000584
  • #Genes/#Species 950/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen10g007590.1

Descriptions

  • Description Encodes a Plant VAMP-Associated protein that localizes to the ER and binds to the sitosterol-binding protein ORP3a. The WFDE motif in ORP3a appears to be important for this direct interaction. Mutation of this motif causes ORP3a to relocalize to the Golgi and cytosol. The interaction between PVA12 and ORP3a does not appear to be sterol-dependent. | plant VAP homolog 12 (PVA12) | FUNCTIONS IN: structural molecule activity | LOCATED IN: cytosol, endoplasmic reticulum, nucleus, plasma membrane | EXPRESSED IN: 26 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: PapD-like , Major sperm protein , Vesicle-associated membrane protein | BEST Arabidopsis thaliana protein match is: vesicle associated protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006605
ISO
PLAZA Integrative Orthologyprotein targeting AT2G45140
GO:0046907
ISO
PLAZA Integrative Orthologyintracellular transport AT3G60600

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G60600

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005789
IEA
InterProendoplasmic reticulum membrane
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G60600
GO:0016021
ISO
PLAZA Integrative Orthologyintegral component of membrane AT3G60600
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G60600
GO:0000326
ISO
PLAZA Integrative Orthologyprotein storage vacuole AT3G60600
GO:0005783
ISO
PLAZA Integrative Orthologyendoplasmic reticulum AT3G60600
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT3G60600

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016763 Vesicle-associated membrane-protein-associated protein
IPR008962 PapD-like superfamily
IPR013783 Immunoglobulin-like fold
IPR000535 Major sperm protein (MSP) domain
Mapman id Description
20.7.1 Cytoskeleton organisation.endoplasmic reticulum-cytoskeleton-plasma membrane interface.contact site protein (VAP27)