Gene: Sopen10g002240

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen10g002240
  • Transcript Identifier Sopen10g002240.1
  • Gene Type Coding gene
  • Location Spenn-ch10 : 1014235-1016844 : positive

Gene Family Information

  • ID HOM05D003917
  • #Genes/#Species 178/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen10g002240.1

Descriptions

  • Description endoribonuclease L-PSP family protein | FUNCTIONS IN: endoribonuclease activity | INVOLVED IN: response to cadmium ion | LOCATED IN: thylakoid, mitochondrion, chloroplast, plastid, vacuole | EXPRESSED IN: 27 plant structures | EXPRESSED DURING: 16 growth stages | CONTAINS InterPro DOMAIN/s: Endoribonuclease L-PSP , YjgF-like protein, conserved site , Endoribonuclease L-PSP/chorismate mutase-like , YjgF-like protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT3G20390
GO:0009082
ISO
PLAZA Integrative Orthologybranched-chain amino acid biosynthetic process AT3G20390

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019239
ISO
PLAZA Integrative Orthologydeaminase activity AT3G20390

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT3G20390
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT3G20390
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT3G20390
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT3G20390
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT3G20390
GO:0009536
ISO
PLAZA Integrative Orthologyplastid AT3G20390
GO:0009579
ISO
PLAZA Integrative Orthologythylakoid AT3G20390

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006175 YjgF/YER057c/UK114 family
IPR035959 RutC-like superfamily
IPR006056 RidA family
Mapman id Description
4.1.2.2.8.1 Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.isoleucine.threonine reactive imine intermediate deaminase (RidA)