Gene: Sopen09g035180

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen09g035180
  • Transcript Identifier Sopen09g035180.1
  • Gene Type Coding gene
  • Location Spenn-ch09 : 83105422-83111222 : positive

Gene Family Information

  • ID HOM05D005307
  • #Genes/#Species 143/91
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen09g035180.1

Descriptions

  • Description RNA recognition motif (RRM)-containing protein | FUNCTIONS IN: zinc ion binding, nucleotide binding, nucleic acid binding | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type , Filamin/ABP280 repeat , Immunoglobulin-like fold , RNA recognition motif, RNP-1 , Immunoglobulin E-set , Nucleotide-binding, alpha-beta plait , Filamin/ABP280 repeat-like | BEST Arabidopsis thaliana protein match is: RNA-directed DNA polymerase (reverse transcriptase)-related family protein .
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:1901652
ISO
PLAZA Integrative Orthologyresponse to peptide AT3G23900

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005515
IEA
InterProprotein binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G23900

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
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InterPro Description
IPR035979 RNA-binding domain superfamily
IPR001298 Filamin/ABP280 repeat
IPR014756 Immunoglobulin E-set
IPR017868 Filamin/ABP280 repeat-like
IPR000504 RNA recognition motif domain
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR013783 Immunoglobulin-like fold
Mapman id Description
35.1 not assigned.annotated