Gene: Sopen09g033520

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen09g033520
  • Transcript Identifier Sopen09g033520.1
  • Gene Type Coding gene
  • Location Spenn-ch09 : 81661045-81664042 : negative

Gene Family Information

  • ID HOM05D001274
  • #Genes/#Species 492/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen09g033520.1

Descriptions

  • Description Eukaryotic translation initiation factor 4E-2 (eIF4E-2) (eIF-4E-2) (mRNA cap-binding protein) (eIF-(iso)4F 25 kDa subunit) (eIF-(iso)4F p28 subunit) - Oryza sativa (Rice), Cap-binding protein, binds to the 5 cap structure of nuclear-encoded mRNAs. Mutant is resistant to potyvirus infection. | LOSS OF SUSCEPTIBILITY TO POTYVIRUS 1 (LSP1) | FUNCTIONS IN: RNA binding, RNA 7-methylguanosine cap binding, translation initiation factor activity | INVOLVED IN: translational initiation, response to virus | LOCATED IN: nucleus, cytoplasm | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 16 growth stages | CONTAINS InterPro DOMAIN/s: Eukaryotic translation initiation factor 4E (eIF-4E) , Eukaryotic translation initiation factor 4E (eIF-4E), conserved site | BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 4E
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006413
IEA
InterProtranslational initiation
GO:0034059
ISO
PLAZA Integrative Orthologyresponse to anoxia Zm00001eb222060
GO:0009615
ISO
PLAZA Integrative Orthologyresponse to virus AT5G35620
GO:0050687
ISO
PLAZA Integrative Orthologynegative regulation of defense response to virus AT5G35620

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
InterProRNA binding
GO:0003743
IEA
InterProtranslation initiation factor activity
GO:0000340
ISO
PLAZA Integrative OrthologyRNA 7-methylguanosine cap binding AT5G35620
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G35620

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G35620
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT5G35620
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G35620

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001040 Translation Initiation factor eIF- 4e
IPR023398 Translation Initiation factor eIF- 4e-like
Mapman id Description
17.4.2.4.1 Protein biosynthesis.translation initiation.mRNA loading.eIF-iso4F unwinding complex.component eIF-iso4E