Gene: Sopen09g027450

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen09g027450
  • Transcript Identifier Sopen09g027450.1
  • Gene Type Coding gene
  • Location Spenn-ch09 : 75276488-75297247 : positive

Gene Family Information

  • ID HOM05D000921
  • #Genes/#Species 653/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen09g027450.1

Descriptions

  • Description Encodes a WD/BEACH domain protein involved in cell morphogenesis. | SPIRRIG (SPI) | FUNCTIONS IN: binding | INVOLVED IN: signal transduction, multidimensional cell growth, vacuole organization, trichome morphogenesis | LOCATED IN: cellular_component unknown | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: WD40 repeat 2 , Beige/BEACH , WD40 repeat, conserved site , WD40 repeat , WD40 repeat-like-containing domain , WD40-repeat-containing domain , WD40/YVTN repeat-like-containing domain , Armadillo-type fold , WD40 repeat, subgroup | BEST Arabidopsis thaliana protein match is: Beige/BEACH domain , WD domain, G-beta repeat protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0007033
ISO
PLAZA Integrative Orthologyvacuole organization AT1G03060
GO:0080001
ISO
PLAZA Integrative Orthologymucilage extrusion from seed coat AT1G03060
GO:1902892
ISO
PLAZA Integrative Orthologypositive regulation of root hair elongation AT1G03060
GO:1903335
ISO
PLAZA Integrative Orthologyregulation of vacuolar transport AT1G03060
GO:0010090
ISO
PLAZA Integrative Orthologytrichome morphogenesis AT1G03060
GO:0071472
ISO
PLAZA Integrative Orthologycellular response to salt stress AT1G03060
GO:0009825
ISO
PLAZA Integrative Orthologymultidimensional cell growth AT1G03060
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT1G03060
GO:0033962
ISO
PLAZA Integrative OrthologyP-body assembly AT1G03060
GO:1904580
ISO
PLAZA Integrative Orthologyregulation of intracellular mRNA localization AT1G03060

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000932
ISO
PLAZA Integrative OrthologyP-body AT1G03060
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT4G02660
GO:0005768
ISO
PLAZA Integrative Orthologyendosome AT1G03060
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT1G03060
GO:0035619
ISO
PLAZA Integrative Orthologyroot hair tip AT1G03060

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011993 PH-like domain superfamily
IPR023362 PH-BEACH domain
IPR036322 WD40-repeat-containing domain superfamily
IPR036372 BEACH domain superfamily
IPR011989 Armadillo-like helical
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR013320 Concanavalin A-like lectin/glucanase domain superfamily
IPR000409 BEACH domain
IPR016024 Armadillo-type fold
IPR001680 WD40 repeat
Mapman id Description
35.1 not assigned.annotated