Gene: Sopen09g025560
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen09g025560
- Transcript Identifier Sopen09g025560.1
- Gene Type Coding gene
- Location Spenn-ch09 : 71532296-71539357 : positive
Gene Family Information
- ID HOM05D000834
- #Genes/#Species 714/100
- Phylogenetic origin
- ID ORTHO05D000909
- #Genes/#Species 559/99
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen09g025560.1
Descriptions
- Description Pyridoxal phosphate (PLP)-dependent transferases superfamily protein | FUNCTIONS IN: pyridoxal phosphate binding, carboxy-lyase activity, catalytic activity, tyrosine decarboxylase activity | INVOLVED IN: response to wounding, cellular amino acid metabolic process | LOCATED IN: cellular_component unknown | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Aromatic-L-amino-acid decarboxylase , Pyridoxal phosphate-dependent transferase, major domain , Pyridoxal phosphate-dependent decarboxylase , Pyridoxal-phosphate binding site , Pyridoxal phosphate-dependent transferase, major region, subdomain 1 , Pyridoxal phosphate-dependent transferase, major region, subdomain 2 | BEST Arabidopsis thaliana protein match is: L-tyrosine decarboxylase
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006520 | IEA | InterPro | cellular amino acid metabolic process | |
| GO:0019752 | IEA | InterPro | carboxylic acid metabolic process | |
| GO:0006559 | ISO | PLAZA Integrative Orthology | L-phenylalanine catabolic process | AT2G20340 |
| GO:1901695 | ISO | PLAZA Integrative Orthology | tyramine biosynthetic process | AT4G28680 |
| GO:0009611 | ISO | PLAZA Integrative Orthology | response to wounding | AT4G28680 |
| GO:0006587 | ISO | PLAZA Integrative Orthology | serotonin biosynthetic process from tryptophan | Os07g0437500 |
| GO:0009414 | ISO | PLAZA Integrative Orthology | response to water deprivation | AT4G28680 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0016831 | IEA | InterPro | carboxy-lyase activity | |
| GO:0016830 | IEA | InterPro | carbon-carbon lyase activity | |
| GO:0030170 | IEA | InterPro | pyridoxal phosphate binding | |
| GO:0004837 | ISO | PLAZA Integrative Orthology | tyrosine decarboxylase activity | AT4G28680 |
| GO:0004058 | ISO | PLAZA Integrative Orthology | aromatic-L-amino-acid decarboxylase activity | AT4G28680 |
| GO:0036469 | ISO | PLAZA Integrative Orthology | L-tryptophan decarboxylase activity | Os07g0437500 |
| GO:1990055 | ISO | PLAZA Integrative Orthology | phenylacetaldehyde synthase activity | AT2G20340 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT4G28680 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR015422 | Pyridoxal phosphate-dependent transferase, small domain |
| IPR015421 | Pyridoxal phosphate-dependent transferase, major domain |
| IPR010977 | Aromatic-L-amino-acid decarboxylase |
| IPR015424 | Pyridoxal phosphate-dependent transferase |
| IPR002129 | Pyridoxal phosphate-dependent decarboxylase |
| Mapman id | Description |
|---|---|
| 4.2.8.3 | Amino acid metabolism.degradation.aromatic amino acid.aromatic amino acid decarboxylase |