Gene: Sopen09g023680
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen09g023680
- Transcript Identifier Sopen09g023680.2
- Gene Type Coding gene
- Location Spenn-ch09 : 67559963-67560557 : positive
Gene Family Information
- ID HOM05D002827
- #Genes/#Species 245/99
- Phylogenetic origin
- ID ORTHO05D003148
- #Genes/#Species 241/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen09g023680.2
Descriptions
- Description Pseudouridine synthase family protein | FUNCTIONS IN: pseudouridine synthase activity | INVOLVED IN: pseudouridine synthesis, RNA modification | CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain , Pseudouridine synthase, RsuA and RluB/C/D/E/F , Pseudouridine synthase, RluC/RluD, conserved site | BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0001522 | ISO | PLAZA Homology (enrichment) | pseudouridine synthesis | HOM05D002827 |
| GO:0009451 | ISO | PLAZA Homology (enrichment) | RNA modification | HOM05D002827 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003723 | ISO | PLAZA Homology (enrichment) | RNA binding | HOM05D002827 |
| GO:0009982 | ISO | PLAZA Homology (enrichment) | pseudouridine synthase activity | HOM05D002827 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
No InterPro domains detected for this gene.
| Mapman id | Description |
|---|---|
| 16.5.3.4 | RNA processing.RNA modification.pseudouridylation.dual-specificity tRNA/rRNA pseudouridine synthase (RluA) |