Gene: Sopen09g022570

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen09g022570
  • Transcript Identifier Sopen09g022570.1
  • Gene Type Coding gene
  • Location Spenn-ch09 : 63119272-63121860 : positive

Gene Family Information

  • ID HOM05D002186
  • #Genes/#Species 307/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen09g022570.1

Descriptions

  • Description Encodes a member of the R protein complex and may represent a virulence target of type III pili effector proteins (virulence factors) from bacterial pathogens, which is guarded by R protein complex (RPM1 and RPS2 proteins). RIN4 physically interacts with RPS2 and RPM1 in vivo. Bacterial avirulence (Avr) effectors AvrB, AvrRpm1, and AvrRpt2 induce a mobility shift in RIN4 and expression of AvrRpt2 induces rapid degradation of RIN4. RIN4 contains 2 sites for AvrRpt2 autocleavage, called RCS1 and RCS2. Overexpression of RIN4 inhibits multiple phenotypes associated with AvrRpt2 function and also inhibits PAMP-induced defense signaling. Attached to the plasma membrane at its carboxyl terminus. Cleaved by AvrRpt2 at two PxFGxW motifs, one releasing a large portion of RIN4 from the plasma membrane and both exposing amino-terminal residues that destabilized the carboxyl-terminal cleavage products by targeting them for N-end ubiquitylation and proteasomal degradation. Major virulence target of the TTSE HopF2Pto. | RPM1 interacting protein 4 (RIN4) | FUNCTIONS IN: protein binding | INVOLVED IN: in 6 processes | LOCATED IN: plasma membrane, membrane | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: RPM1-interacting protein 4, defence response | BEST Arabidopsis thaliana protein match is: defense protein-related
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0034051
ISO
PLAZA Integrative Orthologynegative regulation of plant-type hypersensitive response AT3G25070
GO:0002237
ISO
PLAZA Integrative Orthologyresponse to molecule of bacterial origin AT3G25070
GO:0006955
ISO
PLAZA Integrative Orthologyimmune response AT3G25070
GO:0002758
ISO
PLAZA Integrative Orthologyinnate immune response-activating signal transduction AT3G25070
GO:0006468
ISO
PLAZA Integrative Orthologyprotein phosphorylation AT3G25070
GO:0009626
ISO
PLAZA Integrative Orthologyplant-type hypersensitive response AT3G25070
GO:0042742
ISO
PLAZA Integrative Orthologydefense response to bacterium AT3G25070

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G25070

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
ISO
PLAZA Integrative Orthologymembrane AT3G25070
GO:0019897
ISO
PLAZA Integrative Orthologyextrinsic component of plasma membrane AT3G25070
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT3G25070

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR008700 RIN4, pathogenic type III effector avirulence factor Avr cleavage site
IPR040387 RPM1-interacting protein 4/NOI4
Mapman id Description
26.9.2.2.2 External stimuli response.pathogen.effector-triggered immunity (ETI) network.RIN4-RPM1 immune signalling.RPM1-interacting factor (RIN4)