Gene: Sopen09g012310
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen09g012310
- Transcript Identifier Sopen09g012310.1
- Gene Type Coding gene
- Location Spenn-ch09 : 22392723-22395641 : negative
Gene Family Information
- ID HOM05D000003
- #Genes/#Species 24815/94
- Phylogenetic origin
- ID ORTHO05D000004
- #Genes/#Species 10554/88
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen09g012310.1
Descriptions
- Description Ribonuclease H-like superfamily protein | FUNCTIONS IN: RNA binding, RNA-directed DNA polymerase activity, nucleic acid binding | INVOLVED IN: RNA-dependent DNA replication | LOCATED IN: endomembrane system | CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0004523 | IEA | InterPro | RNA-DNA hybrid ribonuclease activity |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR026960 | Reverse transcriptase zinc-binding domain |
| IPR044730 | Ribonuclease H-like domain, plant type |
| IPR000477 | Reverse transcriptase domain |
| IPR012337 | Ribonuclease H-like superfamily |
| IPR036397 | Ribonuclease H superfamily |
| IPR043502 | DNA/RNA polymerase superfamily |
| IPR002156 | Ribonuclease H domain |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |