Gene: Sopen09g007960

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen09g007960
  • Transcript Identifier Sopen09g007960.1
  • Gene Type Coding gene
  • Location Spenn-ch09 : 7647648-7656773 : positive

Gene Family Information

  • ID HOM05D001720
  • #Genes/#Species 376/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen09g007960.1

Descriptions

  • Description Encodes a subunit of the WAVE complex. The WAVE complex is required for activation of ARP2/3 complex which functions in actin microfilament nucleation and branching. Mutations cause defects in both the actin and microtubule cytoskeletons that result in aberrant epidermal cell expansion. itb1 mutants showed irregularities in trichome branch positioning and expansion. The SHD domain of this protein binds to BRK1 and overexpression of the SHD domain results in a dominant negative phenotype. | SCAR homolog 2 (SCAR2) | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: in 6 processes | LOCATED IN: SCAR complex, plasma membrane, cytoplasm | EXPRESSED IN: 26 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Actin-binding WH2 | BEST Arabidopsis thaliana protein match is: SCAR family protein 4
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030036
IEA
InterProactin cytoskeleton organization
GO:0045010
ISO
PLAZA Integrative Orthologyactin nucleation AT2G38440
GO:0010091
ISO
PLAZA Integrative Orthologytrichome branching AT2G38440
GO:0010090
ISO
PLAZA Integrative Orthologytrichome morphogenesis AT2G38440
GO:0098609
ISO
PLAZA Integrative Orthologycell-cell adhesion AT2G38440
GO:0051127
ISO
PLAZA Integrative Orthologypositive regulation of actin nucleation AT5G01730

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G01730

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005856
IEA
InterProcytoskeleton
GO:0031209
ISO
PLAZA Integrative OrthologySCAR complex AT5G01730
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G01730
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT2G38440
GO:0010287
ISO
PLAZA Integrative Orthologyplastoglobule AT5G01730
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT2G38440

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR028288 SCAR/WAVE family
Mapman id Description
20.2.2.2.4 Cytoskeleton organisation.microfilament network.actin polymerisation.SCAR/WAVE ARP2/3-activating complex.component SCAR