Gene: AT2G38440

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G38440
  • Transcript Identifier AT2G38440.1
  • Gene Type Coding gene
  • Location Chr2 : 16095550-16100851 : positive

Gene Family Information

  • ID HOM05D001720
  • #Genes/#Species 376/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G38440.1
  • symbol SCAR2
  • Alias ATSCAR2,SCAR HOMOLOG 2,DIS3,ITB1,IRREGULAR TRICHOME BRANCH1,WAVE4
  • uniprot Q5XPJ9

Descriptions

  • Description SCAR homolog 2
  • Computational description SCAR homolog 2 (SCAR2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 6 processes; LOCATED IN: SCAR complex, plasma membrane, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Actin-binding WH2 (InterPro:IPR003124); BEST Arabidopsis thaliana protein match is: SCAR family protein 4 (TAIR:AT5G01730.1); Has 5162 Blast hits to 2275 proteins in 363 species: Archae - 24; Bacteria - 2785; Metazoa - 880; Fungi - 591; Plants - 224; Viruses - 0; Other Eukaryotes - 658 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0051127
IMP
ISS
Gene Ontologypositive regulation of actin nucleation1 2
GO:0030036
IEA
GOA Databaseactin cytoskeleton organization
GO:0030036
IMP
IBA
Gene Ontologyactin cytoskeleton organization3 4
GO:0030036
IEA
InterProactin cytoskeleton organization
GO:2000601
IBA
Gene Ontologypositive regulation of Arp2/3 complex-mediated actin nucleation4
GO:0010090
IMP
TAS
Gene Ontologytrichome morphogenesis5 6
GO:0010091
IMP
Gene Ontologytrichome branching3
GO:0098609
IMP
Gene Ontologycell-cell adhesion1
GO:0045010
TAS
Gene Ontologyactin nucleation5

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003779
IEA
GOA Databaseactin binding
GO:0034237
IBA
Gene Ontologyprotein kinase A regulatory subunit binding4
GO:0071933
IBA
Gene OntologyArp2/3 complex binding4
GO:0005515
IPI
Gene Ontologyprotein binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005856
IEA
GOA Databasecytoskeleton
GO:0005856
IEA
InterProcytoskeleton
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
IDA
ISM
Gene Ontologycytoplasm6
GO:0005886
IDA
GOA Databaseplasma membrane
GO:0031209
ISS
TAS
Gene OntologySCAR complex1 3

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR028288 SCAR/WAVE family
Mapman id Description
20.2.2.2.4 Cytoskeleton organisation.microfilament network.actin polymerisation.SCAR/WAVE ARP2/3-activating complex.component SCAR