Gene: Sopen09g002870

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen09g002870
  • Transcript Identifier Sopen09g002870.1
  • Gene Type Coding gene
  • Location Spenn-ch09 : 1572771-1578184 : positive

Gene Family Information

  • ID HOM05D000070
  • #Genes/#Species 3945/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen09g002870.1

Descriptions

  • Description Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean), ATPase, AAA-type, CDC48 protein | FUNCTIONS IN: protein binding, ATPase activity | LOCATED IN: cell wall | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: ATPase, AAA type, core , ATPase, AAA-type, core , ATPase, AAA-type, conserved site , Aspartate decarboxylase-like fold , Cell division protein 48, CDC48, domain 2 , ATPase, AAA-type, VAT, N-terminal , ATPase, AAA-type, CDC48 | BEST Arabidopsis thaliana protein match is: cell division cycle 48
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
InterProATP binding
GO:0016887
IEA
InterProATP hydrolysis activity
GO:0016787
IEA
InterProhydrolase activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR004201 CDC48, domain 2
IPR041569 AAA ATPase, AAA+ lid domain
IPR029067 CDC48 domain 2-like superfamily
IPR003338 CDC48, N-terminal subdomain
IPR003959 ATPase, AAA-type, core
IPR003593 AAA+ ATPase domain
IPR009010 Aspartate decarboxylase-like domain superfamily
IPR005938 AAA ATPase, CDC48 family
Mapman id Description
19.2.4.1.1 Protein homeostasis.ubiquitin-proteasome system.membrane-associated protein degradation.CDC48-NPL4-UFD1 chaperone complex.platform ATPase component CDC48