Gene: Sopen08g030690

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen08g030690
  • Transcript Identifier Sopen08g030690.1
  • Gene Type Coding gene
  • Location Spenn-ch08 : 69846863-69850755 : positive

Gene Family Information

  • ID HOM05D000776
  • #Genes/#Species 759/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen08g030690.1

Descriptions

  • Description Encodes a protein with UDP-D-glucose 4-epimerase activity. | UDP-D-glucose/UDP-D-galactose 4-epimerase 5 (UGE5) | FUNCTIONS IN: UDP-glucose 4-epimerase activity, protein dimerization activity | INVOLVED IN: response to stress | LOCATED IN: endomembrane system | EXPRESSED IN: male gametophyte, root, guard cell, leaf, pollen tube | EXPRESSED DURING: L mature pollen stage, M germinated pollen stage | CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase , NAD(P)-binding domain , UDP-glucose 4-epimerase , Nucleotide sugar epimerase | BEST Arabidopsis thaliana protein match is: UDP-D-glucose/UDP-D-galactose 4-epimerase 2
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006012
IEA
InterProgalactose metabolic process
GO:0010053
ISO
PLAZA Integrative Orthologyroot epidermal cell differentiation AT1G64440
GO:0009969
ISO
PLAZA Integrative Orthologyxyloglucan biosynthetic process AT1G64440
GO:0010306
ISO
PLAZA Integrative Orthologyrhamnogalacturonan II biosynthetic process AT1G64440
GO:0010246
ISO
PLAZA Integrative Orthologyrhamnogalacturonan I biosynthetic process AT1G64440
GO:0042546
ISO
PLAZA Integrative Orthologycell wall biogenesis AT4G23920
GO:0009832
ISO
PLAZA Integrative Orthologyplant-type cell wall biogenesis AT1G64440

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003978
IEA
InterProUDP-glucose 4-epimerase activity
GO:0046983
ISO
PLAZA Integrative Orthologyprotein dimerization activity AT4G23920

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT4G23920
GO:0005795
ISO
PLAZA Integrative OrthologyGolgi stack AT1G64440

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016040 NAD(P)-binding domain
IPR036291 NAD(P)-binding domain superfamily
IPR005886 UDP-glucose 4-epimerase
Mapman id Description
3.13.8 Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-D-glucose 4-epimerase