Gene: Sopen08g027900
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen08g027900
- Transcript Identifier Sopen08g027900.1
- Gene Type Coding gene
- Location Spenn-ch08 : 67566286-67569487 : negative
Gene Family Information
- ID HOM05D005885
- #Genes/#Species 133/99
- Phylogenetic origin
- ID ORTHO05D008127
- #Genes/#Species 123/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen08g027900.1
Descriptions
- Description encodes an amino acid sequence with significant homology to the recently characterized type II photolyases. The uvr2-1 mutant is unable to remove CPDs in vivo, and plant extracts lack detectable photolyase activity , is sensitive to UV-B and is an allele | photolyase 1 (PHR1) | CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold , DNA photolyase, N-terminal , DNA photolyase, FAD-binding/Cryptochrome, C-terminal , DNA photolyase, class 2
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0006281 | IEA | InterPro | DNA repair | |
GO:0000719 | ISO | PLAZA Integrative Orthology | photoreactive repair | AT1G12370 |
GO:0009650 | ISO | PLAZA Integrative Orthology | UV protection | AT1G12370 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003904 | IEA | InterPro | deoxyribodipyrimidine photo-lyase activity | |
GO:0071949 | ISO | PLAZA Integrative Orthology | FAD binding | Os10g0167600 |
GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | Os10g0167600 |
GO:0003913 | ISO | PLAZA Integrative Orthology | DNA photolyase activity | AT1G12370 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
14.9.2 | DNA damage response.photoreactivation.class II photolyase (PHR1) |