Gene: Sopen08g027900

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen08g027900
  • Transcript Identifier Sopen08g027900.1
  • Gene Type Coding gene
  • Location Spenn-ch08 : 67566286-67569487 : negative

Gene Family Information

  • ID HOM05D005885
  • #Genes/#Species 133/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen08g027900.1

Descriptions

  • Description encodes an amino acid sequence with significant homology to the recently characterized type II photolyases. The uvr2-1 mutant is unable to remove CPDs in vivo, and plant extracts lack detectable photolyase activity , is sensitive to UV-B and is an allele | photolyase 1 (PHR1) | CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold , DNA photolyase, N-terminal , DNA photolyase, FAD-binding/Cryptochrome, C-terminal , DNA photolyase, class 2
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006281
IEA
InterProDNA repair
GO:0000719
ISO
PLAZA Integrative Orthologyphotoreactive repair AT1G12370
GO:0009650
ISO
PLAZA Integrative OrthologyUV protection AT1G12370

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003904
IEA
InterProdeoxyribodipyrimidine photo-lyase activity
GO:0071949
ISO
PLAZA Integrative OrthologyFAD binding Os10g0167600
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding Os10g0167600
GO:0003913
ISO
PLAZA Integrative OrthologyDNA photolyase activity AT1G12370

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily
IPR014729 Rossmann-like alpha/beta/alpha sandwich fold
IPR006050 DNA photolyase, N-terminal
IPR008148 DNA photolyase class 2
IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily
Mapman id Description
14.9.2 DNA damage response.photoreactivation.class II photolyase (PHR1)