Gene: Sopen08g027550

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen08g027550
  • Transcript Identifier Sopen08g027550.1
  • Gene Type Coding gene
  • Location Spenn-ch08 : 67248999-67252494 : positive

Gene Family Information

  • ID HOM05D000201
  • #Genes/#Species 1953/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen08g027550.1

Descriptions

  • Description Encodes a protein of unknown function involved in directed root tip growth. It is a member of 19-member gene family and is distantly related structurally to the multiple-copper oxidases ascorbate oxidase and laccase, though it lacks the copper-binding domains. The protein is glycosylated and GPI-anchored. It is localized to the plasma membrane and the cell wall. The gene is expressed most strongly in expanding tissues. | SKU5 | FUNCTIONS IN: oxidoreductase activity, copper ion binding | INVOLVED IN: cell tip growth | LOCATED IN: plasma membrane, anchored to membrane, plant-type cell wall | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 , Cupredoxin , Multicopper oxidase, type 2 , Multicopper oxidase, type 1 | BEST Arabidopsis thaliana protein match is: SKU5 similar 2 ., L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape), Cupredoxin
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009932
ISO
PLAZA Integrative Orthologycell tip growth AT4G12420

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005507
IEA
InterProcopper ion binding
GO:0016491
IEA
InterProoxidoreductase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT4G12420
GO:0048046
ISO
PLAZA Integrative Orthologyapoplast AT4G12420
GO:0009505
ISO
PLAZA Integrative Orthologyplant-type cell wall AT4G12420
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT4G12420
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT4G12420
GO:0046658
ISO
PLAZA Integrative Orthologyanchored component of plasma membrane AT4G12420
GO:0031225
ISO
PLAZA Integrative Orthologyanchored component of membrane AT4G12420

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR008972 Cupredoxin
IPR011706 Multicopper oxidase, C-terminal
IPR011707 Multicopper oxidase, N-termianl
IPR045087 Multicopper oxidase
IPR001117 Multicopper oxidase, type 1
Mapman id Description
50.1.10 Enzyme classification.EC_1 oxidoreductases.EC_1.10 oxidoreductase acting on diphenol or related substance as donor