Gene: Sopen08g027560
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen08g027560
- Transcript Identifier Sopen08g027560.1
- Gene Type Coding gene
- Location Spenn-ch08 : 67258966-67261631 : negative
Gene Family Information
- ID HOM05D000685
- #Genes/#Species 834/94
- Phylogenetic origin
- ID ORTHO05D000511
- #Genes/#Species 832/94
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen08g027560.1
Descriptions
- Description YABBY gene family member, likely has transcription factor activity, involved in specifying abaxial cell fate. Along with FIL, involved in patterning of the fruit. GUS reporter gene expression in seedlings is observed in the young leaves and as the leaf matures, expression is restricted to the abaxial tissues of leaves, expression is also observed on either side of the leaf margin in the younger tissues of leaf blades. | YABBY3 (YAB3) | FUNCTIONS IN: protein binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: fruit development, abaxial cell fate specification, regulation of transcription | EXPRESSED IN: 18 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: High mobility group, superfamily , YABBY protein | BEST Arabidopsis thaliana protein match is: Plant-specific transcription factor YABBY family protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0007275 | IEA | InterPro | multicellular organism development |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.1.4 | RNA biosynthesis.transcriptional regulation.C2C2 transcription factor superfamily.transcription factor (YABBY) |