Gene: Sopen08g025970

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen08g025970
  • Transcript Identifier Sopen08g025970.1
  • Gene Type Coding gene
  • Location Spenn-ch08 : 65700732-65702756 : positive

Gene Family Information

  • ID HOM05D003302
  • #Genes/#Species 207/81
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen08g025970.1

Descriptions

  • Description Intron maturase, type II family protein | FUNCTIONS IN: RNA binding, RNA-directed DNA polymerase activity | INVOLVED IN: RNA-dependent DNA replication, RNA splicing | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Intron maturase, type II , RNA-directed DNA polymerase (reverse transcriptase) | BEST Arabidopsis thaliana protein match is: Intron maturase, type II family protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006397
IEA
InterPromRNA processing
GO:0000373
ISO
PLAZA Integrative OrthologyGroup II intron splicing AT5G46920
GO:0007005
ISO
PLAZA Integrative Orthologymitochondrion organization AT5G46920
GO:0090615
ISO
PLAZA Integrative Orthologymitochondrial mRNA processing AT5G46920

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT5G46920
GO:1990904
ISO
PLAZA Integrative Orthologyribonucleoprotein complex AT5G46920

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR024937 Domain X
IPR043502 DNA/RNA polymerase superfamily
Mapman id Description
16.11.4.2.1.2 RNA processing.organelle machinery.pre-mRNA splicing.mitochondrial RNA splicing.group-II intron splicing.type-I splicing factor (nMAT1/2)