Gene: Sopen08g025970
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen08g025970
- Transcript Identifier Sopen08g025970.1
- Gene Type Coding gene
- Location Spenn-ch08 : 65700732-65702756 : positive
Gene Family Information
- ID HOM05D003302
- #Genes/#Species 207/81
- Phylogenetic origin
- ID ORTHO05D003785
- #Genes/#Species 205/81
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen08g025970.1
Descriptions
- Description Intron maturase, type II family protein | FUNCTIONS IN: RNA binding, RNA-directed DNA polymerase activity | INVOLVED IN: RNA-dependent DNA replication, RNA splicing | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Intron maturase, type II , RNA-directed DNA polymerase (reverse transcriptase) | BEST Arabidopsis thaliana protein match is: Intron maturase, type II family protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0006397 | IEA | InterPro | mRNA processing | |
GO:0000373 | ISO | PLAZA Integrative Orthology | Group II intron splicing | AT5G46920 |
GO:0007005 | ISO | PLAZA Integrative Orthology | mitochondrion organization | AT5G46920 |
GO:0090615 | ISO | PLAZA Integrative Orthology | mitochondrial mRNA processing | AT5G46920 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT5G46920 |
GO:1990904 | ISO | PLAZA Integrative Orthology | ribonucleoprotein complex | AT5G46920 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
16.11.4.2.1.2 | RNA processing.organelle machinery.pre-mRNA splicing.mitochondrial RNA splicing.group-II intron splicing.type-I splicing factor (nMAT1/2) |