Gene: AT5G46920

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G46920
  • Transcript Identifier AT5G46920.1
  • Gene Type Coding gene
  • Location Chr5 : 19053668-19055875 : positive

Gene Family Information

  • ID HOM05D003302
  • #Genes/#Species 207/81
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G46920.1
  • uniprot Q9FJR9

Descriptions

  • Description Intron maturase, type II family protein
  • Computational description Intron maturase, type II family protein; FUNCTIONS IN: RNA binding, RNA-directed DNA polymerase activity; INVOLVED IN: RNA-dependent DNA replication, RNA splicing; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Intron maturase, type II (InterPro:IPR000442), RNA-directed DNA polymerase (reverse transcriptase) (InterPro:IPR000477); BEST Arabidopsis thaliana protein match is: Intron maturase, type II family protein (TAIR:AT1G30010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0090615
IMP
ISS
Gene Ontologymitochondrial mRNA processing1
GO:0000373
IMP
Gene OntologyGroup II intron splicing1
GO:0007005
IMP
Gene Ontologymitochondrion organization2
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis
GO:0006314
IEA
GOA Databaseintron homing
GO:0006397
IEA
GOA DatabasemRNA processing
GO:0006397
IEA
InterPromRNA processing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0004519
IEA
GOA Databaseendonuclease activity
GO:0004518
IEA
GOA Databasenuclease activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISM
Gene Ontologychloroplast
GO:0005739
IEA
GOA Databasemitochondrion
GO:0005739
IDA, HDA
Gene Ontologymitochondrion1 3
GO:1990904
IDA
GOA Databaseribonucleoprotein complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR043502 DNA/RNA polymerase superfamily
IPR024937 Domain X
Mapman id Description
16.11.4.2.1.2 RNA processing.organelle machinery.pre-mRNA splicing.mitochondrial RNA splicing.group-II intron splicing.type-I splicing factor (nMAT1/2)