Gene: Sopen08g025700

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen08g025700
  • Transcript Identifier Sopen08g025700.1
  • Gene Type Coding gene
  • Location Spenn-ch08 : 65482813-65484945 : positive

Gene Family Information

  • ID HOM05D002244
  • #Genes/#Species 300/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen08g025700.1

Descriptions

  • Description pentatricopeptide (PPR) repeat-containing protein | INVOLVED IN: biological_process unknown | LOCATED IN: chloroplast | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat , Smr protein/MutS2 C-terminal | BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G46580

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR033443 Pentacotripeptide-repeat region of PRORP
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR002885 Pentatricopeptide repeat
IPR002625 Smr domain
Mapman id Description
16.11.5.8 RNA processing.organelle machinery.post-transcriptional gene expression regulation.plastidial rRNA processing factor (SOT1)