Gene: Sopen08g025640

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen08g025640
  • Transcript Identifier Sopen08g025640.2
  • Gene Type Coding gene
  • Location Spenn-ch08 : 65430746-65434069 : negative

Gene Family Information

  • ID HOM05D002138
  • #Genes/#Species 314/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen08g025640.2

Descriptions

  • Description Encodes a protein with 3 plant-specific zinc finger domains that acts as a positive regulator of cell death. | lsd one like 1 (LOL1) | FUNCTIONS IN: DNA binding | INVOLVED IN: induction of apoptosis | EXPRESSED IN: 21 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, LSD1-type | BEST Arabidopsis thaliana protein match is: LSD1 zinc finger family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0098542
ISO
PLAZA Integrative Orthologydefense response to other organism AT1G32540
GO:0034052
ISO
PLAZA Integrative Orthologypositive regulation of plant-type hypersensitive response AT1G32540
GO:0034051
ISO
PLAZA Integrative Orthologynegative regulation of plant-type hypersensitive response Os08g0159500
GO:0045595
ISO
PLAZA Integrative Orthologyregulation of cell differentiation Os08g0159500
GO:0043068
ISO
PLAZA Integrative Orthologypositive regulation of programmed cell death AT1G32540
GO:2000121
ISO
PLAZA Integrative Orthologyregulation of removal of superoxide radicals AT1G32540
GO:0031348
ISO
PLAZA Integrative Orthologynegative regulation of defense response Os08g0159500

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus Os08g0159500

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036280 Multiheme cytochrome superfamily
IPR040319 LSD1-like
IPR005735 Zinc finger, LSD1-type
Mapman id Description
27.2.1 Multi-process regulation.Programmed Cell Death (PCD) system.PCD regulatory protein (LSD/LOL)