Gene: Sopen08g025370
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen08g025370
- Transcript Identifier Sopen08g025370.1
- Gene Type Coding gene
- Location Spenn-ch08 : 65131727-65133502 : positive
Gene Family Information
- ID HOM05D000318
- #Genes/#Species 1452/97
- Phylogenetic origin
- ID ORTHO05D000420
- #Genes/#Species 954/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen08g025370.1
Descriptions
- Description Encodes a transmembrane protein of the tetraspanin (TET) family, one of 17 members found in Arabidopsis. Double mutant analysis showed that TRN1 and TRN2 act in the same pathway. Required for the maintenance of both the radial pattern of tissue differentiation in the root and for the subsequent circumferential pattern within the epidermis. | TORNADO 2 (TRN2) | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: radial pattern formation, meristem structural organization, aging, leaf vascular tissue pattern formation, root morphogenesis | LOCATED IN: plasma membrane | EXPRESSED IN: 32 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Tetraspanin | BEST Arabidopsis thaliana protein match is: tetraspanin2
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009734 | IEA | InterPro | auxin-activated signaling pathway | |
| GO:0010305 | ISO | PLAZA Integrative Orthology | leaf vascular tissue pattern formation | AT5G46700 |
| GO:0009554 | ISO | PLAZA Integrative Orthology | megasporogenesis | AT5G46700 |
| GO:0009956 | ISO | PLAZA Integrative Orthology | radial pattern formation | AT5G46700 |
| GO:0009934 | ISO | PLAZA Integrative Orthology | regulation of meristem structural organization | AT5G46700 |
| GO:0009933 | ISO | PLAZA Integrative Orthology | meristem structural organization | AT5G46700 |
| GO:0010015 | ISO | PLAZA Integrative Orthology | root morphogenesis | AT5G46700 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016021 | IEA | InterPro | integral component of membrane | |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT5G46700 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT5G46700 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |