Gene: Sopen08g024400

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen08g024400
  • Transcript Identifier Sopen08g024400.1
  • Gene Type Coding gene
  • Location Spenn-ch08 : 64217202-64221929 : positive

Gene Family Information

  • ID HOM05D000274
  • #Genes/#Species 1592/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen08g024400.1

Descriptions

  • Description One of several nuclear-encoded ClpPs (caseinolytic protease). Contains a highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001). | CLP protease P4 (CLPP4) | FUNCTIONS IN: serine-type endopeptidase activity | INVOLVED IN: chloroplast organization, regulation of timing of transition from vegetative to reproductive phase | LOCATED IN: in 7 components | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Peptidase S14, ClpP, active site , Peptidase S14, ClpP | BEST Arabidopsis thaliana protein match is: CLP protease proteolytic subunit 3
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006508
IEA
InterProproteolysis
GO:0048510
ISO
PLAZA Integrative Orthologyregulation of timing of transition from vegetative to reproductive phase AT5G45390
GO:0009658
ISO
PLAZA Integrative Orthologychloroplast organization AT5G45390

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004176
IEA
InterProATP-dependent peptidase activity
GO:0004252
IEA
InterProserine-type endopeptidase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT5G45390
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G45390
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT5G45390
GO:0009840
ISO
PLAZA Integrative Orthologychloroplastic endopeptidase Clp complex AT5G45390
GO:0009532
ISO
PLAZA Integrative Orthologyplastid stroma AT5G45390
GO:0009535
ISO
PLAZA Integrative Orthologychloroplast thylakoid membrane AT5G45390
GO:0009579
ISO
PLAZA Integrative Orthologythylakoid AT5G45390

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
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InterPro Description
IPR029045 ClpP/crotonase-like domain superfamily
IPR001907 ATP-dependent Clp protease proteolytic subunit
IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA
Mapman id Description
19.4.2.9.1 Protein homeostasis.proteolysis.serine-type peptidase activities.chloroplast Clp-type protease complex.proteolytic core component ClpP1/3-6