Gene: AT5G45390

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G45390
  • Transcript Identifier AT5G45390.1
  • Gene Type Coding gene
  • Location Chr5 : 18396351-18397586 : positive

Gene Family Information

  • ID HOM05D000274
  • #Genes/#Species 1592/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G45390.1
  • symbol CLPP4
  • Alias NCLPP4,NUCLEAR-ENCODED CLP PROTEASE P4
  • uniprot Q94B60

Descriptions

  • Description CLP protease P4
  • Computational description CLP protease P4 (CLPP4); FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: chloroplast organization, regulation of timing of transition from vegetative to reproductive phase; LOCATED IN: in 7 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S14, ClpP, active site (InterPro:IPR018215), Peptidase S14, ClpP (InterPro:IPR001907); BEST Arabidopsis thaliana protein match is: CLP protease proteolytic subunit 3 (TAIR:AT1G66670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006515
IBA
Gene Ontologyprotein quality control for misfolded or incompletely synthesized proteins1
GO:0006508
IEA
GOA Databaseproteolysis
GO:0006508
IEA
InterProproteolysis
GO:0048510
IMP
Gene Ontologyregulation of timing of transition from vegetative to reproductive phase2
GO:0009658
IMP
Gene Ontologychloroplast organization2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0004252
IEA
GOA Databaseserine-type endopeptidase activity
GO:0004252
IBA
Gene Ontologyserine-type endopeptidase activity1
GO:0004252
IEA
InterProserine-type endopeptidase activity
GO:0008236
IEA
GOA Databaseserine-type peptidase activity
GO:0008233
IEA
GOA Databasepeptidase activity
GO:0004176
IEA
GOA DatabaseATP-dependent peptidase activity
GO:0004176
IBA
Gene OntologyATP-dependent peptidase activity1
GO:0004176
IEA
InterProATP-dependent peptidase activity
GO:0051117
IBA
Gene OntologyATPase binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
IEA
GOA Databasechloroplast stroma
GO:0009570
IDA, HDA
Gene Ontologychloroplast stroma3 4
GO:0009941
IDA
GOA Databasechloroplast envelope
GO:0009941
HDA
Gene Ontologychloroplast envelope5
GO:0009507
IDA
IEA
GOA Databasechloroplast
GO:0009507
HDA
ISM
Gene Ontologychloroplast6
GO:0009579
IDA
GOA Databasethylakoid
GO:0009579
HDA
Gene Ontologythylakoid7
GO:0009536
IEA
GOA Databaseplastid
GO:0009536
HDA
Gene Ontologyplastid8
GO:0009368
IBA
Gene Ontologyendopeptidase Clp complex1
GO:0005829
RCA
Gene Ontologycytosol9
GO:0009532
IDA
Gene Ontologyplastid stroma10
GO:0009840
IDA
Gene Ontologychloroplastic endopeptidase Clp complex3
GO:0009535
IDA
Gene Ontologychloroplast thylakoid membrane3

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001907 ATP-dependent Clp protease proteolytic subunit
IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA
IPR029045 ClpP/crotonase-like domain superfamily
Mapman id Description
19.4.2.9.1 Protein homeostasis.proteolysis.serine-type peptidase activities.chloroplast Clp-type protease complex.proteolytic core component ClpP1/3-6