Gene: Sopen08g009660

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen08g009660
  • Transcript Identifier Sopen08g009660.1
  • Gene Type Coding gene
  • Location Spenn-ch08 : 22064159-22072271 : negative

Gene Family Information

  • ID HOM05D000014
  • #Genes/#Species 7439/72
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen08g009660.1

Descriptions

  • Description RNA polymerase beta subunit-1 | RPOC1 | FUNCTIONS IN: DNA-directed RNA polymerase activity | INVOLVED IN: RNA elongation | LOCATED IN: chloroplast, nucleoid | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: RNA polymerase, N-terminal , RNA polymerase, alpha subunit , RNA polymerase Rpb1, domain 3 , RNA polymerase Rpb1, domain 1 | BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase C1 ., DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase beta subunit) (RNA polymerase beta subunit) - Cucumis sativus (Cucumber)
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006351
IEA
InterProtranscription, DNA-templated

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0003899
IEA
InterProDNA-directed 5'-3' RNA polymerase activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR007080 RNA polymerase Rpb1, domain 1
IPR021109 Aspartic peptidase domain superfamily
IPR005162 Retrotransposon gag domain
Mapman id Description
35.1 not assigned.annotated