Gene: Sopen07g033330

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen07g033330
  • Transcript Identifier Sopen07g033330.1
  • Gene Type Coding gene
  • Location Spenn-ch07 : 78189114-78195808 : positive

Gene Family Information

  • ID HOM05D001160
  • #Genes/#Species 532/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen07g033330.1

Descriptions

  • Description Glycerophosphoryl diester phosphodiesterase-like protein involved in cell wall cellulose accumulation and pectin linking. Impacts root hair, trichome and epidermal cell development. | SHV3-like 1 (SVL1) | FUNCTIONS IN: phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity | INVOLVED IN: trichome differentiation, cell wall pectin metabolic process, glycerol metabolic process, guard cell morphogenesis, plant-type cell wall cellulose metabolic process | LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane | EXPRESSED IN: 30 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: PLC-like phosphodiesterase, TIM beta/alpha-barrel domain , Glycerophosphoryl diester phosphodiesterase | BEST Arabidopsis thaliana protein match is: PLC-like phosphodiesterase family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030643
ISO
PLAZA Integrative Orthologycellular phosphate ion homeostasis AT1G66970
GO:0010026
ISO
PLAZA Integrative Orthologytrichome differentiation AT4G26690
GO:0010442
ISO
PLAZA Integrative Orthologyguard cell morphogenesis AT4G26690
GO:0052541
ISO
PLAZA Integrative Orthologyplant-type cell wall cellulose metabolic process AT4G26690
GO:0006968
ISO
PLAZA Integrative Orthologycellular defense response AT1G66980
GO:0006629
IEA
InterProlipid metabolic process
GO:0009932
ISO
PLAZA Integrative Orthologycell tip growth AT4G26690
GO:0006952
ISO
PLAZA Integrative Orthologydefense response AT1G66980
GO:0048765
ISO
PLAZA Integrative Orthologyroot hair cell differentiation AT4G26690
GO:0010053
ISO
PLAZA Integrative Orthologyroot epidermal cell differentiation AT4G26690

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005509
ISO
PLAZA Integrative Orthologycalcium ion binding AT1G66970
GO:0008889
ISO
PLAZA Integrative Orthologyglycerophosphodiester phosphodiesterase activity AT1G66970
GO:0008081
IEA
InterProphosphoric diester hydrolase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046658
ISO
PLAZA Integrative Orthologyanchored component of plasma membrane AT4G26690
GO:0031225
ISO
PLAZA Integrative Orthologyanchored component of membrane AT4G26690
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT5G55480
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT4G26690

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR030395 Glycerophosphodiester phosphodiesterase domain
IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily
Mapman id Description
35.1 not assigned.annotated