Gene: AT1G66970

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G66970
  • Transcript Identifier AT1G66970.1
  • Gene Type Coding gene
  • Location Chr1 : 24992746-24996005 : negative

Gene Family Information

  • ID HOM05D001160
  • #Genes/#Species 532/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G66970.1
  • symbol SVL2
  • Alias GDPDL1,Glycerophosphodiester phosphodiesterase (GDPD) like 1
  • uniprot Q7Y208

Descriptions

  • Description SHV3-like 2
  • Computational description SHV3-like 2 (SVL2); FUNCTIONS IN: glycerophosphodiester phosphodiesterase activity, kinase activity; INVOLVED IN: glycerol metabolic process, lipid metabolic process; LOCATED IN: anchored to plasma membrane, apoplast, chloroplast, anchored to membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), Glycerophosphoryl diester phosphodiesterase (InterPro:IPR004129); BEST Arabidopsis thaliana protein match is: suppressor of npr1-1 constitutive 4 (TAIR:AT1G66980.1); Has 1600 Blast hits to 1093 proteins in 369 species: Archae - 0; Bacteria - 1195; Metazoa - 10; Fungi - 0; Plants - 324; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006629
IEA
Gene Ontologylipid metabolic process
GO:0006629
IEA
InterProlipid metabolic process
GO:0006071
IEA
GOA Databaseglycerol metabolic process
GO:0030643
IMP
Gene Ontologycellular phosphate ion homeostasis1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008081
IEA
GOA Databasephosphoric diester hydrolase activity
GO:0008081
IEA
InterProphosphoric diester hydrolase activity
GO:0008889
IBA
GOA Databaseglycerophosphodiester phosphodiesterase activity
GO:0008889
IDA
IEA
Gene Ontologyglycerophosphodiester phosphodiesterase activity1
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0005509
IDA
Gene Ontologycalcium ion binding1
GO:0016301
ISS
Gene Ontologykinase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
IEA
GOA Databaseplasma membrane
GO:0005886
IDA, HDA
Gene Ontologyplasma membrane2 3
GO:0016020
IEA
GOA Databasemembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0005739
HDA
Gene Ontologymitochondrion4
GO:0099503
HDA
Gene Ontologysecretory vesicle5
GO:0048046
HDA
Gene Ontologyapoplast6
GO:0009507
HDA
Gene Ontologychloroplast7
GO:0031225
IDA
TAS
Gene Ontologyanchored component of membrane2 8
GO:0046658
HDA
Gene Ontologyanchored component of plasma membrane9

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily
IPR030395 Glycerophosphodiester phosphodiesterase domain
Mapman id Description
35.1 not assigned.annotated