Gene: AT4G26690

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G26690
  • Transcript Identifier AT4G26690.1
  • Gene Type Coding gene
  • Location Chr4 : 13456793-13459890 : negative

Gene Family Information

  • ID HOM05D001160
  • #Genes/#Species 532/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G26690.1
  • symbol SHV3
  • Alias GDPDL3,Glycerophosphodiester phosphodiesterase (GDPD) like 3,GPDL2,GLYCEROPHOSPHODIESTERASE-LIKE 2,MRH5,MUTANT ROOT HAIR 5
  • full_name SHAVEN 3
  • uniprot Q9SZ11

Descriptions

  • Description PLC-like phosphodiesterase family protein
  • Computational description SHAVEN 3 (SHV3); FUNCTIONS IN: glycerophosphodiester phosphodiesterase activity, kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane, plant-type cell wall; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), Glycerophosphoryl diester phosphodiesterase (InterPro:IPR004129); BEST Arabidopsis thaliana protein match is: SHV3-like 2 (TAIR:AT1G66970.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006629
IEA
Gene Ontologylipid metabolic process
GO:0006629
IEA
InterProlipid metabolic process
GO:0071555
IEA
GOA Databasecell wall organization
GO:0006071
IEA
GOA Databaseglycerol metabolic process
GO:0052541
IGI
Gene Ontologyplant-type cell wall cellulose metabolic process1
GO:0010442
IGI
Gene Ontologyguard cell morphogenesis1
GO:0010026
IGI
Gene Ontologytrichome differentiation1
GO:0048765
IMP
Gene Ontologyroot hair cell differentiation2
GO:0010053
IMP
Gene Ontologyroot epidermal cell differentiation3
GO:0009932
IMP
Gene Ontologycell tip growth3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008081
IEA
GOA Databasephosphoric diester hydrolase activity
GO:0008081
IEA
InterProphosphoric diester hydrolase activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0008889
IEA
GOA Databaseglycerophosphodiester phosphodiesterase activity
GO:0008889
IBA
Gene Ontologyglycerophosphodiester phosphodiesterase activity4
GO:0016301
ISS
Gene Ontologykinase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
HDA
Gene Ontologycytosol5
GO:0016020
IEA
GOA Databasemembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0005886
IEA
GOA Databaseplasma membrane
GO:0005886
IDA, HDA
Gene Ontologyplasma membrane1 6
GO:0046658
IDA
Gene Ontologyanchored component of plasma membrane7
GO:0031225
TAS
Gene Ontologyanchored component of membrane8

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR030395 Glycerophosphodiester phosphodiesterase domain
IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily
Mapman id Description
35.1 not assigned.annotated