Gene: Sopen07g030800
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen07g030800
- Transcript Identifier Sopen07g030800.1
- Gene Type Coding gene
- Location Spenn-ch07 : 76284930-76290229 : positive
Gene Family Information
- ID HOM05D000050
- #Genes/#Species 4474/100
- Phylogenetic origin
- ID ORTHO05D002706
- #Genes/#Species 268/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen07g030800.1
Descriptions
- Description UBC35/UBC13A encodes a protein that may play a role in DNA damage responses and error-free post-replicative DNA repair by participating in lysine-63-based polyubiquitination reactions. UBC35/UBC13A can form diubiquitin and triubiquitin chains in combination with MMZ1,2,3,4/(UEV1A,B,C,D) in vitro. It can also functionally complement an mms2 ubc13 mutation in budding yeast by increasing the double mutants viability in the presence of the DNA damaging agent MMS, when it is co-expressed with MMZ / UEV1 genes. A wild type phenotype is restored with MMZ3/UEV1C and MMZ4/UEV1D, but only partial complementation is achieved with MMZ1/UEV1A or MMZ2/UEV1B. | ubiquitin-conjugating enzyme 35 (UBC35) | FUNCTIONS IN: ubiquitin-protein ligase activity, protein binding | INVOLVED IN: root epidermal cell differentiation, response to cadmium ion, postreplication repair, response to iron ion, ubiquitin-dependent protein catabolic process | LOCATED IN: UBC13-MMS2 complex | EXPRESSED IN: male gametophyte, cultured cell, pollen tube | EXPRESSED DURING: L mature pollen stage, M germinated pollen stage | CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like , Ubiquitin-conjugating enzyme, E2 | BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 36
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0010053 | ISO | PLAZA Integrative Orthology | root epidermal cell differentiation | AT1G78870 |
GO:0010039 | ISO | PLAZA Integrative Orthology | response to iron ion | AT1G78870 |
GO:0046686 | ISO | PLAZA Integrative Orthology | response to cadmium ion | AT1G78870 |
GO:0006301 | ISO | PLAZA Integrative Orthology | postreplication repair | AT1G78870 |
GO:0006511 | ISO | PLAZA Integrative Orthology | ubiquitin-dependent protein catabolic process | AT1G78870 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0004842 | ISO | PLAZA Integrative Orthology | ubiquitin-protein transferase activity | AT1G78870 |
GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G78870 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0031372 | ISO | PLAZA Integrative Orthology | UBC13-MMS2 complex | AT1G78870 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
19.2.2.1.3 | Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-conjugating E2 protein (UBC) |