Gene: Sopen07g030800

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen07g030800
  • Transcript Identifier Sopen07g030800.1
  • Gene Type Coding gene
  • Location Spenn-ch07 : 76284930-76290229 : positive

Gene Family Information

  • ID HOM05D000050
  • #Genes/#Species 4474/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen07g030800.1

Descriptions

  • Description UBC35/UBC13A encodes a protein that may play a role in DNA damage responses and error-free post-replicative DNA repair by participating in lysine-63-based polyubiquitination reactions. UBC35/UBC13A can form diubiquitin and triubiquitin chains in combination with MMZ1,2,3,4/(UEV1A,B,C,D) in vitro. It can also functionally complement an mms2 ubc13 mutation in budding yeast by increasing the double mutants viability in the presence of the DNA damaging agent MMS, when it is co-expressed with MMZ / UEV1 genes. A wild type phenotype is restored with MMZ3/UEV1C and MMZ4/UEV1D, but only partial complementation is achieved with MMZ1/UEV1A or MMZ2/UEV1B. | ubiquitin-conjugating enzyme 35 (UBC35) | FUNCTIONS IN: ubiquitin-protein ligase activity, protein binding | INVOLVED IN: root epidermal cell differentiation, response to cadmium ion, postreplication repair, response to iron ion, ubiquitin-dependent protein catabolic process | LOCATED IN: UBC13-MMS2 complex | EXPRESSED IN: male gametophyte, cultured cell, pollen tube | EXPRESSED DURING: L mature pollen stage, M germinated pollen stage | CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like , Ubiquitin-conjugating enzyme, E2 | BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 36
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010053
ISO
PLAZA Integrative Orthologyroot epidermal cell differentiation AT1G78870
GO:0010039
ISO
PLAZA Integrative Orthologyresponse to iron ion AT1G78870
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT1G78870
GO:0006301
ISO
PLAZA Integrative Orthologypostreplication repair AT1G78870
GO:0006511
ISO
PLAZA Integrative Orthologyubiquitin-dependent protein catabolic process AT1G78870

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004842
ISO
PLAZA Integrative Orthologyubiquitin-protein transferase activity AT1G78870
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G78870

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031372
ISO
PLAZA Integrative OrthologyUBC13-MMS2 complex AT1G78870

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016135 Ubiquitin-conjugating enzyme/RWD-like
IPR000608 Ubiquitin-conjugating enzyme E2
Mapman id Description
19.2.2.1.3 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-conjugating E2 protein (UBC)