Gene: Sopen07g029980
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen07g029980
- Transcript Identifier Sopen07g029980.1
- Gene Type Coding gene
- Location Spenn-ch07 : 75557639-75564955 : positive
Gene Family Information
- ID HOM05D003098
- #Genes/#Species 221/95
- Phylogenetic origin
- ID ORTHO05D003634
- #Genes/#Species 212/95
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Sopen07g029980.1
Descriptions
- Description RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein .
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0080113 | ISO | PLAZA Integrative Orthology | regulation of seed growth | AT1G17145 |
| GO:0046620 | ISO | PLAZA Integrative Orthology | regulation of organ growth | AT1G17145 |
| GO:0016567 | ISO | PLAZA Integrative Orthology | protein ubiquitination | AT1G17145 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0061630 | ISO | PLAZA Integrative Orthology | ubiquitin protein ligase activity | AT1G78420 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G78420 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR039301 | Protein Sip5/DA2 |
| Mapman id | Description |
|---|---|
| 19.2.2.1.4.3.6 | Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.E3 ubiquitin ligase (DA2) |