Gene: AT1G17145

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G17145
  • Transcript Identifier AT1G17145.1
  • Gene Type Coding gene
  • Location Chr1 : 5860351-5862241 : negative

Gene Family Information

  • ID HOM05D003098
  • #Genes/#Species 221/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G17145.1
  • uniprot Q940G8

Descriptions

  • Description RING/U-box superfamily protein
  • Computational description RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G78420.2); Has 249 Blast hits to 247 proteins in 115 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 148; Plants - 77; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IDA
IEA
Gene Ontologyprotein ubiquitination1
GO:0046620
IMP
Gene Ontologyregulation of organ growth1
GO:0080113
IMP
Gene Ontologyregulation of seed growth1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0016740
IEA
GOA Databasetransferase activity
GO:0061630
ISO
PLAZA Integrative Orthologyubiquitin protein ligase activity Os02g0244100

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISM
Gene Ontologycytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR039301 Protein Sip5/DA2
Mapman id Description
19.2.2.1.4.3.6 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.E3 ubiquitin ligase (DA2)