Gene: Sopen07g023170

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen07g023170
  • Transcript Identifier Sopen07g023170.1
  • Gene Type Coding gene
  • Location Spenn-ch07 : 68018526-68024631 : positive

Gene Family Information

  • ID HOM05D006642
  • #Genes/#Species 121/91
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen07g023170.1

Descriptions

  • Description Tetratricopeptide repeat (TPR)-like superfamily protein | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: endomembrane system | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G59040

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G59040
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT3G59040
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT3G59040

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR002885 Pentatricopeptide repeat
Mapman id Description
16.11.5.6 RNA processing.organelle machinery.post-transcriptional gene expression regulation.plastidial RNA processing factor (PPR287)