Gene: Sopen07g018350
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen07g018350
- Transcript Identifier Sopen07g018350.2
- Gene Type Coding gene
- Location Spenn-ch07 : 56011475-56057767 : positive
Gene Family Information
- ID HOM05D000002
- #Genes/#Species 26594/98
- Phylogenetic origin
- ID ORTHO05D000001
- #Genes/#Species 28434/96
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen07g018350.2
Descriptions
- Description beta-galactosidase, glycosyl hydrolase family 35 | beta galactosidase 1 (BGAL1) | FUNCTIONS IN: beta-galactosidase activity | INVOLVED IN: carbohydrate metabolic process | LOCATED IN: cell wall, plant-type cell wall | EXPRESSED IN: 27 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site , Glycoside hydrolase, family 35 , D-galactoside/L-rhamnose binding SUEL lectin , Glycoside hydrolase, catalytic core , Glycoside hydrolase, subgroup, catalytic core , Galactose-binding domain-like | BEST Arabidopsis thaliana protein match is: beta-galactosidase 3
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0015074 | IEA | InterPro | DNA integration | |
| GO:0005975 | IEA | InterPro | carbohydrate metabolic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030246 | IEA | InterPro | carbohydrate binding | |
| GO:0004553 | IEA | InterPro | hydrolase activity, hydrolyzing O-glycosyl compounds | |
| GO:0003676 | IEA | InterPro | nucleic acid binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR017853 | Glycoside hydrolase superfamily |
| IPR008979 | Galactose-binding-like domain superfamily |
| IPR031330 | Glycoside hydrolase 35, catalytic domain |
| IPR000922 | D-galactoside/L-rhamnose binding SUEL lectin domain |
| IPR013103 | Reverse transcriptase, RNA-dependent DNA polymerase |
| IPR012337 | Ribonuclease H-like superfamily |
| IPR029472 | Retrotransposon Copia-like, N-terminal |
| IPR001584 | Integrase, catalytic core |
| IPR043502 | DNA/RNA polymerase superfamily |
| IPR043159 | D-galactoside/L-rhamnose binding SUEL lectin domain superfamily |
| IPR041392 | Beta-galactosidase, beta-sandwich domain |
| IPR005162 | Retrotransposon gag domain |
| IPR001944 | Glycoside hydrolase, family 35 |
| IPR036397 | Ribonuclease H superfamily |
| Mapman id | Description |
|---|---|
| 50.3.2 | Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase |