Gene: Sopen07g014130

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen07g014130
  • Transcript Identifier Sopen07g014130.1
  • Gene Type Coding gene
  • Location Spenn-ch07 : 37046050-37046933 : negative

Gene Family Information

  • ID HOM05D001645
  • #Genes/#Species 393/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen07g014130.1

Descriptions

  • Description Ribosomal protein S4 | FUNCTIONS IN: structural constituent of ribosome | INVOLVED IN: translation | LOCATED IN: cytosolic small ribosomal subunit, membrane | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Ribosomal protein S4 , Ribosomal protein S4, conserved site , Ribosomal protein S4/S9, eukaryotic/archaeal , RNA-binding S4 | BEST Arabidopsis thaliana protein match is: Ribosomal protein S4
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
InterProtranslation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
InterProRNA binding
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0019843
IEA
InterProrRNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G39850
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT5G39850

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015935
IEA
InterProsmall ribosomal subunit
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G15200
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT5G39850
GO:0022626
ISO
PLAZA Integrative Orthologycytosolic ribosome AT5G15200
GO:0022627
ISO
PLAZA Integrative Orthologycytosolic small ribosomal subunit AT5G15200
GO:0005618
ISO
PLAZA Integrative Orthologycell wall AT5G15200
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G39850
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT5G15200
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT5G15200
GO:0042788
ISO
PLAZA Integrative Orthologypolysomal ribosome AT5G15200

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002942 RNA-binding S4 domain
IPR005710 Ribosomal protein S4/S9, eukaryotic/archaeal
IPR022801 Ribosomal protein S4/S9
IPR001912 Ribosomal protein S4/S9, N-terminal
IPR036986 RNA-binding S4 domain superfamily
Mapman id Description
17.1.3.1.10 Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS9