Gene: Sopen07g002060

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen07g002060
  • Transcript Identifier Sopen07g002060.1
  • Gene Type Coding gene
  • Location Spenn-ch07 : 1000249-1011024 : positive

Gene Family Information

  • ID HOM05D001522
  • #Genes/#Species 417/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen07g002060.1

Descriptions

  • Description DNA-directed RNA polymerase 3, chloroplast precursor (EC 2.7.7.6) (T7 bacteriophage-type single subunit RNA polymerase 3) (NsRpoT-C) - Nicotiana sylvestris (Wood tobacco), SCABRA 3 (SCA3) | FUNCTIONS IN: DNA-directed RNA polymerase activity, protein binding, DNA binding | INVOLVED IN: transcription | LOCATED IN: mitochondrion | EXPRESSED IN: 21 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, bacteriophage type | BEST Arabidopsis thaliana protein match is: male gametophyte defective 3
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006351
IEA
InterProtranscription, DNA-templated

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0003899
IEA
InterProDNA-directed 5'-3' RNA polymerase activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G24120

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT2G24120

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR037159 DNA-directed RNA polymerase, N-terminal domain superfamily
IPR029262 DNA-directed RNA polymerase, N-terminal
IPR002092 DNA-directed RNA polymerase, phage-type
IPR043502 DNA/RNA polymerase superfamily
IPR024075 DNA-directed RNA polymerase, helix hairpin domain superfamily
Mapman id Description
15.6.1.1 RNA biosynthesis.organelle machinery.RNA polymerase activities.nuclear-encoded organellar RNA polymerase (NEP)