Gene: Sopen06g033520

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen06g033520
  • Transcript Identifier Sopen06g033520.1
  • Gene Type Coding gene
  • Location Spenn-ch06 : 58964400-58967310 : positive

Gene Family Information

  • ID HOM05D001155
  • #Genes/#Species 535/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen06g033520.1

Descriptions

  • Description Pyruvate decarboxylase isozyme 2 (EC 4.1.1.1) (PDC) - Nicotiana tabacum (Common tobacco), Thiamine pyrophosphate dependent pyruvate decarboxylase family protein | FUNCTIONS IN: in 6 functions | LOCATED IN: membrane | EXPRESSED IN: 11 plant structures | EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage | CONTAINS InterPro DOMAIN/s: TPP-binding enzyme, conserved site , Thiamine pyrophosphate enzyme, central domain , Pyruvate decarboxylase/indolepyruvate decarboxylase , Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain , Thiamine pyrophosphate enzyme, C-terminal TPP-binding | BEST Arabidopsis thaliana protein match is: Thiamine pyrophosphate dependent pyruvate decarboxylase family protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0001666
ISO
PLAZA Integrative Orthologyresponse to hypoxia AT5G54960
GO:0034059
ISO
PLAZA Integrative Orthologyresponse to anoxia AT4G33070

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030976
IEA
InterProthiamine pyrophosphate binding
GO:0016831
IEA
InterProcarboxy-lyase activity
GO:0000287
IEA
InterPromagnesium ion binding
GO:0003824
IEA
InterProcatalytic activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT4G33070

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain
IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme
IPR012000 Thiamine pyrophosphate enzyme, central domain
IPR029061 Thiamin diphosphate-binding fold
IPR029035 DHS-like NAD/FAD-binding domain superfamily
IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding
Mapman id Description
3.11.1.1 Carbohydrate metabolism.fermentation.acetic acid biosynthesis.pyruvate decarboxylase (PDC)