Gene: Sopen06g030290
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen06g030290
- Transcript Identifier Sopen06g030290.1
- Gene Type Coding gene
- Location Spenn-ch06 : 56385317-56388297 : positive
Gene Family Information
- ID HOM05D001689
- #Genes/#Species 383/95
- Phylogenetic origin
- ID ORTHO05D001643
- #Genes/#Species 376/95
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Sopen06g030290.1
Descriptions
- Description encodes a RING-type E3 ubiquitin ligase implicated in gametogenesis. Double mutant analyses with RHF1a suggests that RHF2a may be involved in targetting ICK4KRP6 for degradation following meiosis in order to allow the mitoses associated with megagametogenesis and microgametogenesis to occur. RHF2a is expressed in all four floral whorls and is present at ~8-fold higher levels than RHF1a in inflorescences by RT-PCR analyses. | RING-H2 group F2A (RHF2A) | FUNCTIONS IN: zinc ion binding | INVOLVED IN: regulation of cell cycle, proteolysis involved in cellular protein catabolic process, megagametogenesis, microgametogenesis | LOCATED IN: plasma membrane | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING-H2 group F1A
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0009561 | ISO | PLAZA Integrative Orthology | megagametogenesis | AT5G22000 |
GO:0055046 | ISO | PLAZA Integrative Orthology | microgametogenesis | AT5G22000 |
GO:0051726 | ISO | PLAZA Integrative Orthology | regulation of cell cycle | AT5G22000 |
GO:0051603 | ISO | PLAZA Integrative Orthology | proteolysis involved in cellular protein catabolic process | AT5G22000 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT5G22000 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
13.7.4.4 | Cell cycle organisation.germline development.embryogenesis.E3 ubiquitin protein ligase (RHF) |