Gene: Sopen06g030290

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen06g030290
  • Transcript Identifier Sopen06g030290.1
  • Gene Type Coding gene
  • Location Spenn-ch06 : 56385317-56388297 : positive

Gene Family Information

  • ID HOM05D001689
  • #Genes/#Species 383/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen06g030290.1

Descriptions

  • Description encodes a RING-type E3 ubiquitin ligase implicated in gametogenesis. Double mutant analyses with RHF1a suggests that RHF2a may be involved in targetting ICK4KRP6 for degradation following meiosis in order to allow the mitoses associated with megagametogenesis and microgametogenesis to occur. RHF2a is expressed in all four floral whorls and is present at ~8-fold higher levels than RHF1a in inflorescences by RT-PCR analyses. | RING-H2 group F2A (RHF2A) | FUNCTIONS IN: zinc ion binding | INVOLVED IN: regulation of cell cycle, proteolysis involved in cellular protein catabolic process, megagametogenesis, microgametogenesis | LOCATED IN: plasma membrane | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING-H2 group F1A
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009561
ISO
PLAZA Integrative Orthologymegagametogenesis AT5G22000
GO:0055046
ISO
PLAZA Integrative Orthologymicrogametogenesis AT5G22000
GO:0051726
ISO
PLAZA Integrative Orthologyregulation of cell cycle AT5G22000
GO:0051603
ISO
PLAZA Integrative Orthologyproteolysis involved in cellular protein catabolic process AT5G22000

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT5G22000

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001841 Zinc finger, RING-type
IPR013083 Zinc finger, RING/FYVE/PHD-type
Mapman id Description
13.7.4.4 Cell cycle organisation.germline development.embryogenesis.E3 ubiquitin protein ligase (RHF)